Table 1.
miRNAs encoded by viruses known to infect human.
Virus | Encoded miRNAs |
---|---|
Epstein Barr Virus | ebv-miR-BART4-3p CACAUCACGUAGGCACCAGGUGU |
ebv-miR-BART20-3p CAUGAAGGCACAGCCUGUUACC | |
ebv-miR-BHRF1-2-5p AAAUUCUGUUGCAGCAGAUAGC | |
ebv-miR-BART22 UUACAAAGUCAUGGUCUAGUAGU | |
ebv-miR-BART14-3p UAAAUGCUGCAGUAGUAGGGAU | |
ebv-miR-BART10-3p UACAUAACCAUGGAGUUGGCUGU | |
ebv-miR-BART7-3p CAUCAUAGUCCAGUGUCCAGGG | |
ebv-miR-BART16 UUAGAUAGAGUGGGUGUGUGCUCU | |
ebv-miR-BART15 GUCAGUGGUUUUGUUUCCUUGA | |
ebv-miR-BART9-3p UAACACUUCAUGGGUCCCGUAGU | |
ebv-miR-BART21-5p UCACUAGUGAAGGCAACUAAC | |
ebv-miR-BART3-3p CGCACCACUAGUCACCAGGUGU | |
ebv-miR-BART7-5p CCUGGACCUUGACUAUGAAACA | |
ebv-miR-BART1-3p UAGCACCGCUAUCCACUAUGUC | |
ebv-miR-BART11-5p UCAGACAGUUUGGUGCGCUAGUUG | |
ebv-miR-BART6-3p CGGGGAUCGGACUAGCCUUAGA | |
ebv-miR-BART13-5p AACCGGCUCGUGGCUCGUACAG | |
ebv-miR-BART1-5p UCUUAGUGGAAGUGACGUGCUGUG | |
ebv-miR-BART2-5p UAUUUUCUGCAUUCGCCCUUGC | |
ebv-miR-BART2-3p AAGGAGCGAUUUGGAGAAAAUAAA | |
ebv-miR-BHRF1-3 UAACGGGAAGUGUGUAAGCACA | |
ebv-miR-BART14-5p UACCCUACGCUGCCGAUUUACA | |
ebv-miR-BART18-5p UCAAGUUCGCACUUCCUAUACA | |
ebv-miR-BART4-5p GACCUGAUGCUGCUGGUGUGCU | |
ebv-miR-BART8-3p GUCACAAUCUAUGGGGUCGUAGA | |
ebv-miR-BHRF1-2-3p UAUCUUUUGCGGCAGAAAUUGA | |
ebv-miR-BART20-5p UAGCAGGCAUGUCUUCAUUCC | |
ebv-miR-BART13-3p UGUAACUUGCCAGGGACGGCUGA | |
ebv-miR-BART19-3p UUUUGUUUGCUUGGGAAUGCU | |
ebv-miR-BART8-5p UACGGUUUCCUAGAUUGUACAG | |
ebv-miR-BART5-5p CAAGGUGAAUAUAGCUGCCCAUCG | |
ebv-miR-BART17-3p UGUAUGCCUGGUGUCCCCUUAGU | |
ebv-miR-BART17-5p UAAGAGGACGCAGGCAUACAAG | |
ebv-miR-BHRF1-1 UAACCUGAUCAGCCCCGGAGUU | |
ebv-miR-BART19-5p ACAUUCCCCGCAAACAUGACAUG | |
ebv-miR-BART18-3p UAUCGGAAGUUUGGGCUUCGUC | |
ebv-miR-BART6-5p UAAGGUUGGUCCAAUCCAUAGG | |
ebv-miR-BART12 UCCUGUGGUGUUUGGUGUGGUU | |
ebv-miR-BART21-3p CUAGUUGUGCCCACUGGUGUUU | |
ebv-miR-BART3-5p ACCUAGUGUUAGUGUUGUGCU | |
ebv-miR-BART5-3p GUGGGCCGCUGUUCACCU | |
ebv-miR-BART9-5p UACUGGACCCUGAAUUGGAAAC | |
ebv-miR-BART10-5p GCCACCUCUUUGGUUCUGUACA | |
ebv-miR-BART11-3p ACGCACACCAGGCUGACUGCC | |
Herpes Simplex Virus 1 | hsv1-miR-H8-5p UAUAUAGGGUCAGGGGGUUC |
hsv1-miR-H13 UUAGGGCGAAGUGCGAGCACUGG | |
hsv1-miR-H1-5p GAUGGAAGGACGGGAAGUGGA | |
hsv1-miR-H6-5p GGUGGAAGGCAGGGGGGUGUA | |
hsv1-miR-H11 UUAGGACAAAGUGCGAACGC | |
hsv1-miR-H14-3p UCUGUGCCGGGCGCGUGCGAC | |
hsv1-miR-H7-5p AAAGGGGUCUGCAACCAAAGG | |
hsv1-miR-H26 UGGCUCGGUGAGCGACGGUC | |
hsv1-miR-H7-3p UUUGGAUCCCGACCCCUCUUC | |
hsv1-miR-H8-3p GCCCCCGGUCCCUGUAUAUA | |
hsv1-miR-H6-3p CACUUCCCGUCCUUCCAUCCC | |
hsv1-miR-H1-3p UACACCCCCCUGCCUUCCACCCU | |
hsv1-miR-H2-3p CCUGAGCCAGGGACGAGUGCGACU | |
hsv1-miR-H3-3p CUGGGACUGUGCGGUUGGGAC | |
hsv1-miR-H4-5p GGUAGAGUUUGACAGGCAAGCA | |
hsv1-miR-H17 UGGCGCUGGGGCGCGAGGCGG | |
hsv1-miR-H14-5p AGUCGCACUCGUCCCUGGCUCAGG | |
hsv1-miR-H4-3p CUUGCCUGUCUAACUCGCUAGU | |
hsv1-miR-H16 CCAGGAGGCUGGGAUCGAAGGC | |
hsv1-miR-H5-5p GGGGGGGUUCGGGCAUCUCUAC | |
hsv1-miR-H2-5p UCGCACGCGCCCGGCACAGACU | |
hsv1-miR-H12 UUGGGACGAAGUGCGAACGCUU | |
hsv1-miR-H18 CCCGCCCGCCGGACGCCGGGACC | |
hsv1-miR-H15 GGCCCCGGGCCGGGCCGCCACG | |
hsv1-miR-H5-3p GUCAGAGAUCCAAACCCUCCGG | |
hsv1-miR-H3-5p CUCCUGACCGCGGGUUCCGAGU | |
Herpes Simplex Virus 2 | hsv2-miR-H11-3p UUAGGACAAAGUGCGAACGCUU |
hsv2-miR-H7-5p AAAGGGGUCCGUAACCAAAGG | |
hsv2-miR-H23-3p ACGAGCUUCGCGGUACUACUC | |
hsv2-miR-H19 UUCGCUAGGCAAGCACGGACUG | |
hsv2-miR-H4-5p GAGUUCACUCGGCACGCAUGC | |
hsv2-miR-H3 UUUGGGAGUCUGCGGUUGGGAG | |
hsv2-miR-H20 UUUGGUUACGGACCCCUUUCU | |
hsv2-miR-H21 AUAACGUCAUGCUGUCUACGG | |
hsv2-miR-H9-3p UUCCCACCUCGGUCUCCUCCUC | |
hsv2-miR-H6-3p CCCAUCUUCUGCCCUUCCAUCCU | |
hsv2-miR-H23-5p AGGCCGUGGAGCUUGCCAGC | |
hsv2-miR-H7-3p UUUGGAUUCCGACCCCUCGUC | |
hsv2-miR-H11-5p AAGCGUUCGCACUUUGUCCUA | |
hsv2-miR-H5 GGGGGGGCUCGGGCCACCUGACC | |
hsv2-miR-H4-3p CCGUGCUUGCCUAGCGAACUC | |
hsv2-miR-H10 GGGUGCGGGGGUGGGCGG | |
hsv2-miR-H22 AGGGGUCUGGACGUGGGUGGGC | |
hsv2-miR-H25 CUGCGCGGCGGAGACCGGGAC | |
hsv2-miR-H13 UUAGGGCAAAGUGCGAGCACUG | |
hsv2-miR-H2 UCUGAGCCUGGGUCAUGCGCGA | |
hsv2-miR-H9-5p CUCGGAGGUGGAGUCGCGGU | |
hsv2-miR-H6-5p AAUGGAAGGCGAGGGGAUGC | |
hsv2-miR-H12 UUAGGACGAAGUGCGAACGCUU | |
hsv2-miR-H24 CUCCGGCGCCUUCCCCCCGCCCU | |
BK | bkv-miR-B1-3p UGCUUGAUCCAUGUCCAGAGUC |
Polyomavirus | bkv-miR-B1-5p AUCUGAGACUUGGGAAGAGCAU |
Human cytomegalovirus | hcmv-miR-US25-1-3p UCCGAACGCUAGGUCGGUUCUC |
hcmv-miR-US25-2-3p AUCCACUUGGAGAGCUCCCGCGG | |
hcmv-miR-UL36-3p UUUCCAGGUGUUUUCAACGUGC | |
hcmv-miR-US4 CGACAUGGACGUGCAGGGGGAU | |
hcmv-miR-UL70-3p GGGGAUGGGCUGGCGCGCGG | |
hcmv-miR-US25-2-5p AGCGGUCUGUUCAGGUGGAUGA | |
hcmv-miR-UL70-5p UGCGUCUCGGCCUCGUCCAGA | |
hcmv-miR-UL22A-5p UAACUAGCCUUCCCGUGAGA | |
hcmv-miR-UL36-5p UCGUUGAAGACACCUGGAAAGA | |
hcmv-miR-US25-1-5p AACCGCUCAGUGGCUCGGACC | |
hcmv-miR-UL112 AAGUGACGGUGAGAUCCAGGCU | |
hcmv-miR-US33-5p GAUUGUGCCCGGACCGUGGGCG | |
hcmv-miR-UL148D UCGUCCUCCCCUUCUUCACCG | |
hcmv-miR-US5-2 UUAUGAUAGGUGUGACGAUGUC | |
hcmv-miR-US5-1 UGACAAGCCUGACGAGAGCGU | |
hcmv-miR-UL22A-3p UCACCAGAAUGCUAGUUUGUAG | |
hcmv-miR-US33-3p UCACGGUCCGAGCACAUCCA | |
Human Immunodeficiency virus | hiv1-miR-H1 CCAGGGAGGCGUGCCUGGGC |
hiv1-miR-N367 ACUGACCUUUGGAUGGUGCUUCAA | |
hiv1-miR-TAR-3p UCUCUGGCUAACUAGGGAACCCA | |
hiv1-miR-TAR-5p UCUCUCUGGUUAGACCAGAUCUGA | |
JC polyomavirus | jcv-miR-J1-3p UGCUUGAUCCAUGUCCAGAGUC |
jcv-miR-J1-5p UUCUGAGACCUGGGAAAAGCAU | |
Kaposi's sarcoma associated herpesvirus | kshv-miR-K12-5-3p UAGGAUGCCUGGAACUUGCCGGU |
kshv-miR-K12-4-3p UAGAAUACUGAGGCCUAGCUGA | |
kshv-miR-K12-8-5p ACUCCCUCACUAACGCCCCGCU | |
kshv-miR-K12-10a-3p UAGUGUUGUCCCCCCGAGUGGC | |
kshv-miR-K12-5-5p AGGUAGUCCCUGGUGCCCUAAGG | |
kshv-miR-K12-8-3p CUAGGCGCGACUGAGAGAGCA | |
kshv-miR-K12-6-3p UGAUGGUUUUCGGGCUGUUGAG | |
kshv-miR-K12-6-5p CCAGCAGCACCUAAUCCAUCGG | |
kshv-miR-K12-3-5p UCACAUUCUGAGGACGGCAGCGA | |
kshv-miR-K12-2-5p AACUGUAGUCCGGGUCGAUCUG | |
kshv-miR-K12-12-3p UGGGGGAGGGUGCCCUGGUUGA | |
kshv-miR-K12-11-5p GGUCACAGCUUAAACAUUUCUAGG | |
kshv-miR-K12-1-3p GCAGCACCUGUUUCCUGCAACC | |
kshv-miR-K12-9-3p CUGGGUAUACGCAGCUGCGUAA | |
kshv-miR-K12-12-5p AACCAGGCCACCAUUCCUCUCCG | |
kshv-miR-K12-10b UGGUGUUGUCCCCCCGAGUGGC | |
kshv-miR-K12-3-3p UCGCGGUCACAGAAUGUGACA | |
kshv-miR-K12-11-3p UUAAUGCUUAGCCUGUGUCCGA | |
kshv-miR-K12-1-5p AUUACAGGAAACUGGGUGUAAGC | |
kshv-miR-K12-9-5p ACCCAGCUGCGUAAACCCCGCU | |
kshv-miR-K12-2-3p GAUCUUCCAGGGCUAGAGCUG | |
kshv-miR-K12-7-5p AGCGCCACCGGACGGGGAUU | |
Merkel cell polyomavirus | mcv-miR-M1-5p UGGAAGAAUUUCUAGGUACACU |
mcv-miR-M1-3p UGUGCUGGAUUCUCUUCCUGAA | |
Simian virus 40 | sv40-miR-S1-3p GCCUGUUUCAUGCCCUGAGU |
sv40-miR-S1-5p UGAGGGGCCUGAAAUGAGCCUU |