Table 3.
Targets of miRNAs expressed in HIV infected PBMCs on human APOBEC family genes.
Gene symbol | Transcript accession (RefSeq) | Targeting miRNAs |
---|---|---|
APOBEC2 | NM_006789 | hsa-miR-324-3p,hsa-miR-329,hsa-miR-107,hsa-miR-378,hsa-miR-770-5p,hsa-miR-508-3p,hsa-miR-508-3p |
APOBEC3G | NM_021822 | hsa-miR-520g |
APOBEC3D | NM_152426 | hsa-miR-508-5p,hsa-miR-125a-5p,hsa-miR-32,hsa-miR-423-5p,hsa-miR-1,hsa-miR-206,hsa-miR-129-5p,hsa-miR-129-5p,hsa-miR-107,hsa-miR-210,hsa-miR-512-5p,hsa-miR-615-3p |
APOBEC4 | NM_203454 | hsa-miR-125a-5p,hsa-miR-298,hsa-miR-22,hsa-miR-142-5p,hsa-miR-199a-3p,hsa-miR-301b,hsa-miR-372,hsa-miR-372,hsa-miR-494,hsa-miR-496,hsa-miR-520g,hsa-miR-93,hsa-miR-484 |
APOBEC1 | NM_001644 | hsa-miR-329,hsa-miR-526a |
APOBEC3A | NM_145699 | hsa-miR-372,hsa-miR-520g,hsa-miR-93,hsa-miR-129-5p,hsa-miR-129-5p,hsa-miR-433 |
APOBEC3F | NM_145298 | hsa-miR-508-5p,hsa-miR-1197,hsa-miR-125a-5p,hsa-miR-298,hsa-miR-22,hsa-miR-32,hsa-miR-423-5p,hsa-miR-671-5p,hsa-miR-1,hsa-miR-206,hsa-miR-450b-5p,hsa-miR-494,hsa-miR-527,hsa-miR-760,hsa-miR-875-3p,hsa-miR-93,hsa-miR-129-5p,hsa-miR-208a,hsa-miR-208b,hsa-miR-299-3p,hsa-miR-484,hsa-miR-296-3p,hsa-miR-342-3p,hsa-miR-210,hsa-miR-512-5p,hsa-miR-615-5p,hsa-miR-485-3p |
APOBEC3C | NM_014508 | hsa-miR-125a-5p,hsa-miR-423-5p,hsa-miR-1,hsa-miR-206,hsa-miR-875-3p,hsa-miR-875-3p,hsa-miR-107 |
APOBEC3H | NM_001166003, NM_001166002, NM_181773 | hsa-miR-372,hsa-miR-520g,hsa-miR-93 |
APOBEC3H | NM_001166004 | hsa-miR-770-5p |