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. 2014 Jul 30;8:67. doi: 10.3389/fninf.2014.00067

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Copyright © 2014 Friedel, van Eede, Pipitone, Chakravarty and Lerch.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Code diagram to complement Figures 7, 9. This figure illustrates the modular nature of how Pydpiper executes each of the stages in this pipeline. Diagramatically, each of the code blocks highlighted in Figure 9 is indicated here as a single unit. One of the non-linear stages is expanded to show the complexity of the pipeline that underlies it.