Table 1.
Echinococcus granulosus CO1 and ND1 sequence data from the present study, together with reference sequences from previous studies used for nucleotide sequence comparison and phylogenetic analysis (GenBank accession numbers)
| Haplotype/Genotype | Host origin (no) | Accession no (CO1) | Accession no (ND1) | References (CO1 and ND1, respectively) |
|---|---|---|---|---|
| Haplotype 1 | Human (1), Cattle (1) | HQ717150 | HQ717151 | The present study |
| Haplotype 2 | Human (1) | HQ717155 | HQ717154 | The present study |
| Haplotype 3 | Human (1) | HQ717150 | HQ717152 | The present study |
| Haplotype 4 | Human (1) | HQ717148 | HQ717153 | The present study |
| Haplotype 5 | Human (1) | HQ717148 | HQ717151 | The present study |
| Haplotype 6 | Human (5) | HQ703429 | HQ717151 | The present study |
| Haplotype 7 | Sheep (1) | HQ717149 | HQ717151 | The present study |
| Haplotype 8 | Cattle (1) | HQ717156 | HQ717151 | The present study |
| Genotype 1 | Sheep | U50464 | AJ237632 | 25, 26 |
| Genotype 2 | Sheep | M84662 | AJ237633 | 24, 26 |
| Genotype 3 | Buffalo | M84663 | AJ237634 | 24, 26 |
| Genotype 4 | Horse | M84664 | AJ237635 | 24, 26 |
| Genotype 5 | Cattle | M84665 | AJ237636 | 24, 26 |
| Genotype 6 | Camel | M84666 | AJ237637 | 24, 26 |
| Genotype 7 | Pig | M84667 | AJ237638 | 24, 26 |
| Genotype 8 | Moose | AB235848 | AJ237643 | 6, 27 |
| Genotype 10 | Reindeer | AF525457 | AF525297 | 28 |
| E. multilocularis* | Human | M84668 | AJ237639 | 24, 26 |
| E. multilocularis** | Rodent | M84669 | AJ237640 | 24, 26 |
| E. shiquicus | Pika | AB208064 | AB208064 | 6 |
| E. vogeli | Rodent | M84670 | AJ237641 | 24, 26 |
| E. oligarthrus | Rodent | M84671 | AJ237642 | 24, 26 |
| E. felidis | Lion | EF558356 | EF558357 | 29 |
| Outgroup: | ||||
| T. saginata | Cattle | AB465239 | AJ239106 | 30, 31 |
CO1: Cytochrome c oxidase subunit 1, ND1: NADH dehydrogenase subunit 1,
*:
Asterisks relate also to Figure 2