Table 2. Single molecule analysis of PTB target sites on FAS RNA.
RNA | Number of PTB target sites | Fraction of RNA with bound PTB-GFP, % | ||
---|---|---|---|---|
A | B | C | ||
wt FAS | 3–4 | 3–4.5 | 3–4 | 2.6 |
m0 mutant | 3 | 2–4 | 3 | 2.9 |
Tpm 1 RNA | 5–6 | 6.5 | 6 | 7.9 |
(A) the number of the target sites was estimated by fitting distribution of bleaching steps by the truncated binomial distribution; (B) the number of the target sites was estimated by linear fit of iPi/P(i−1) values; (C) the number of the target sites was estimated from the analysis of total emissions (see Materials and Methods). The data in the last column were obtained at 1:20 dilution of PTB-GFP overexpressesing nuclear extract.