Table 1. G-rich oligonucleotides used in this work.
DNA | Sequence (from 5′ to 3′)a | Extinction coefficient (L mol−1 cm−1) | Structure |
---|---|---|---|
Hum21 | GGG(TTAGGG)3 | 215 000 | G-quadruplex (monomeric) |
Hum45 | GGG(TTAGGG)7 | 459 400 | G-quadruplex (multimeric) |
Hum51 | GGG(TTAGGG)8 | 520 500 | G-quadruplex (multimeric) |
Hum51-M1 | GGG(TTAGGG)7TGTGAG | 520 300 | G-quadruplex (multimeric) |
Hum51-M2 | GGG(TTAGGG)3TTGAGTGTAGGG(TTAGGG)3 | 520 300 | G-quadruplex (multimeric) |
Hum57 | GGG(TTAGGG)9 | 581 600 | G-quadruplex (multimeric) |
Hum57-M1 | GGG(TTAGGG)7TGTGAGTGTGAG | 581 200 | G-quadruplex (multimeric) |
Hum57-M2 | GGG(TTAGGG)3TTGAGTGTAGGG(TTAGGG)3TGTGAG | 581 200 | G-quadruplex (multimeric) |
Hum57-M3 | GGG(TTAGGG)3TTGAGTGTGAGTGTAGGG(TTAGGG)3 | 581 200 | G-quadruplex (multimeric) |
Hum63 | GGG(TTAGGG)10 | 642 700 | G-quadruplex (multimeric) |
Hum63-M1 | GGG(TTAGGG)7TGTGAGTGTGAGTGTGAG | 642 100 | G-quadruplex (multimeric) |
Hum63-M2 | GGG(TTAGGG)3TTGAGTGTAGGG(TTAGGG)3TGTGAGTGTGAG | 642 100 | G-quadruplex (multimeric) |
Hum63-M3 | GGG(TTAGGG)3TTGAGTGTGAGTGTAGGG(TTAGGG)3TGTGAG | 642 100 | G-quadruplex (multimeric) |
Hum69 | GGG(TTAGGG)11 | 703 800 | G-quadruplex (multimeric) |
C-MYC | TGAGGGTGGGAGGGTGGGAA | 209 700 | G-quadruplex (monomeric) |
KRAS | AGGGCGGTGGGAAGAGGGAAGAGGGGGAGG | 322 200 | G-quadruplex (monomeric) |
M3Q | GAGGGAGGGAGGGAGAGGGA | 222 500 | G-quadruplex (monomeric) |
Oxy28 | GGGGTTTTGGGGTTTTGGGGTTTGGGG | 253 900 | G-quadruplex (monomeric) |
AT | (AT)6 | 133 300 | Duplex |
GC | (GC)6 | 101 100 | Duplex |
LD | GCGCAATTGCGC | 108 700 | Duplex |
ssDNA1 | GAGCTCTCGAAAGAGCTCCGATTA | 235 800 | Single-stranded |
ssDNA2 | TAGAGCACACCTGTCCGTG | 179 500 | Single-stranded |
aThe underlined bold letters identify rearranged sequences that cannot be participated in the formation of G-quadruplex units.