Table 4.
Read counts at the CCL3L1 gene (chr17:34623842-34625730) (1.9 kb) of samples called 0 copies by CNVrd2.
| Sample ID | Average coverage (2 Mb) | Read count at CCL3L1 | Read count at CCL3L1-containing region | Population |
|---|---|---|---|---|
| HG00240 | 7.3 | 1 | 75 | GBR |
| HG00290 | 7.4 | 0 | 36 | FIN |
| HG00336 | 3.4 | 0 | 35 | FIN |
| HG00410 | 10.1 | 0 | 69 | CHS |
| HG00553 | 3.3 | 0 | 29 | PUR |
| HG01112 | 4.8 | 0 | 37 | CLM |
| HG01204 | 4.8 | 0 | 109 | PUR |
| HG01260 | 7.2 | 1 | 40 | CLM |
| HG01280 | 8.1 | 0 | 23 | CLM |
| HG01286 | 4.6 | 4 | 68 | PUR |
| HG01302 | 5.4 | 0 | 23 | PUR |
| HG01474 | 5.1 | 0 | 40 | CLM |
| HG01489 | 5.2 | 0 | 58 | CLM |
| HG01504 | 5.3 | 0 | 42 | IBS |
| HG01506 | 6.4 | 0 | 30 | IBS |
| HG01550 | 4.7 | 0 | 38 | CLM |
| HG01767 | 8.3 | 0 | 42 | IBS |
| HG01864 | 8.4 | 0 | 64 | KHV |
| HG01873 | 20.2 | 0 | 103 | KHV |
| HG02122 | 6.2 | 0 | 58 | KHV |
| HG02385 | 4.6 | 0 | 19 | CDX |
| HG02604 | 7.1 | 2 | 78 | PJL |
| HG02648 | 6.9 | 0 | 37 | PJL |
| HG02652 | 6.9 | 0 | 45 | PJL |
| HG02658 | 8.8 | 3 | 127 | PJL |
| HG03589 | 5.8 | 0 | 48 | BEB |
| HG03673 | 8.6 | 2 | 68 | STU |
| HG03968 | 5.4 | 2 | 34 | ITU |
| HG04019 | 5.6 | 0 | 39 | ITU |
| HG04062 | 4.0 | 0 | 21 | ITU |
| HG04156 | 5.4 | 0 | 32 | BEB |
| NA07056 | 5.8 | 0 | 54 | CEU |
| NA11831 | 5.8 | 1 | 67 | CEU |
| NA18574 | 4.7 | 0 | 66 | CHB |
| NA20507 | 6.1 | 0 | 49 | TSI |
| NA20540 | 3.9 | 0 | 67 | TSI |
| NA20589 | 7.0 | 0 | 41 | TSI |
| NA20754 | 8.2 | 0 | 33 | TSI |
| NA20762 | 7.0 | 0 | 42 | TSI |
| NA20764 | 8.3 | 1 | 44 | TSI |
| NA20778 | 8.3 | 0 | 78 | TSI |
| NA20850 | 4.1 | 0 | 30 | GIH |
| NA20903 | 7.7 | 0 | 43 | GIH |
The average coverage is calculated for the 2 Mb region (chr17:33670000-35670000).