Table 1. Primers for MSP of the ABCG1, GALNT2 and HMGCR genes.
Group | Forward primer(5′to3′) | Reversr primer(5′to3′) | Product size (bp) | Tm |
ABCG1 M | 5′ ATTTGTATTGTGATATCGACGAGAC 3′ | 5′ CTTACCTCCTCGATTCTAAACGTAC 3′ | 251 | 54 |
ABCG1 U | 5′ AGATTTGTATTGTGATATTGATGAGAT 3′ | 5′ AACTTACCTCCTCAATTCTAAACATAC 3′ | 251 | 48 |
GALNT2 M | 5′ TTATAAGATAGATCGTTTTTTTGTATC 3′ | 5′ CCGCTAATATCGATTTTATTTAT 3′ | 263 | 48 |
GALNT2 U | 5′ ATGTTATAAGATAGATTGTTTTTTTGTATT 3′ | 5′ AACCCACTAATATCAATTTTATTTAT 3′ | 263 | 46 |
HMGCR M | 5′ TATAAGAGAGAGAGACGTAGGTGATC 3′ | 5′ CCCGTACTCGTCCTAACTATAATAA 3′ | 290 | 55 |
HMGCR U | 5′ GTATATAAGAGAGAGAGATGTAGGTGATT 3′ | 5′ TAACCCATACTCATCCTAACTATAATAA 3′ | 290 | 54 |
MSP: methylation-specific polymerase chain reaction; M: methylation-specific primers; U: unmethylation-specific primers.