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. 2014 Aug 1;9(8):e103865. doi: 10.1371/journal.pone.0103865

Table 2. List of primers used in this study.

Primer Target Primer sequence 5′-3′ Reference
strA_F aminoglycoside phosphotransferase ACCCTAAAACTCTTCAATGC [10]
strA_R aminoglycoside phosphotransferase TCCCCAATACATTGAATAGG [10]
sul1_F dihydropteroate synthase GTCTAAGAGCGGCGCAATAC [10]
sul1_R dihydropteroate synthase GGATCAGACGTCGTGGATGT [10]
sul2_F dihydropteroate synthase CGCAATGTGATCCATGATGT [10]
sul2_R dihydropteroate synthase GCGAAATCATCTGCCAAACT [10]
tetB_F tetracycline efflux protein TACAGGGATTATTGGTGAGC [10]
tetB_R tetracycline efflux protein ACATGAAGGTCATCGATAGC [10]
tetA_F tetracycline efflux protein CGATCTTCCAAGCGTTTGTT [10]
tetA_R tetracycline efflux protein CCAGAAGAACGAAGCCAGTC [10]
cat_F chloramphenicol acetyl transferase GGGAAATAGGCCAGGTTTTC [10]
cat_R chloramphenicol acetyl transferase TCCATGAGCAAACTGAAACG [10]
aadA_F aminoglycoside adenyltransferase CAGCCCGTCTTACTTGAAGC [10]
aadA_R aminoglycoside adenyltransferase GATCTCGCCTTTCACAAAGC [10]
tetG_F tetracycline efflux protein GATTGGTGAGGCTCGTTAGC [10]
tetG_R tetracycline efflux protein GTGTTCCCGATTCTGTTGCT [10]
aacA_F aminoglycoside (6′)-acetyltransferase CTGGGCAAAGGCTTGGGAAC this study
aacA_R aminoglycoside (6′)-acetyltransferase AACCCCGCTTTCTCGTAGCA this study
ereA_F erythromycin esterase CGCTCATTTTGTCGCGGAGT this study
ereA_R erythromycin esterase GCACCGGCTGTTGAGTTGAG this study
dfrA22_F dihydrofolate reductase ATGCACTGGCACTACCTCGT this study
dfrA22_R dihydrofolate reductase GCGTCACCCTCGAAGGTTTG this study
blaP-1_F PSE-1/CARB-2 beta-lactamase CAGGCTTCAATGGCAGAGCG this study
blaP-1_R PSE-1/CARB-2 beta-lactamase AACAAGCGACGGAAAAGCCG this study
aphA_F aminoglycoside phosphotransferase CGATCTCGCCTGACGATTGC this study
aphA_R aminoglycoside phosphotransferase GCGTCGCCATGTGTGACTAC this study
cmlA1_F chloramphenicol efflux protein CGCACAATAAGGCTCCTCGC this study
cmlA1_R chloramphenicol efflux protein CTGCGGCTTACTTGTCTGCG this study
qnrVC1_F protein interacting with DNA/type-II-topoisomerases GCTCGTGGCAACAGGAACAG this study
qnrVC1_R protein interacting with DNA/type-II-topoisomerases AACCGCCAAACGTTGCGAAT this study
arr-8_F rifampin ADP-ribosylating transferase AGGGTCGCACACTCAAGCA this study
arr-8_R rifampin ADP-ribosylating transferase TATCCCCGGCCATCTAGACCA this study
16Suniv_F all bacteria GAGGAAGGIGIGGAIGACGT [30]
16Suniv_R all bacteria AGICCCGIGAACGTATTCAC [30]
5CS class I integron 5′ conserved sequence GGCATCCAAGCAGCAAG [28]
3CS class I integron 3′ conserved sequence AAGCAGACTTGACCTGA [28]