Table 3.
Totiviridae nucleotide sequences used in this study grouped according to phylogenetic analysis
| Virus name | Acession code (GI) | Abbreviation |
|---|---|---|
| MoV-like | ||
| Beauveria bassiana RNA virus 1 (2672–5176) | 345108726 | BeauV |
| Tolypocladium cylindrosporum virus 1 (2604–5126) | 315573168 | TcV-1 |
| Botryotinia fuckeliana totivirus 1 (2631–5147) | 134141995 | BotryV |
| Helminthosporium victoriae virus 190S (2605–5112) | 124484600 | HvV-190S |
| Chalara elegans RNA virus 1 (2619–4067) | 48696977 | ChalElV |
| Helicobasidium mompa totivirus 1–17 (2563–5100) | 33867950 | HmV1-17 |
| Magnaporthe oryzae virus 1 (2818–5316) | 54193767 | MoV-1 |
| IMNV-like | ||
| Penaeid shrimp infectious myonecrosis virus (5241–7490) | 459680256 | IMNV |
| Tianjin totivirus (5319–7535) | 380715048 | TianV |
| Omono river virus (5202–7535) | 307933349 | ORV |
| Drosophila melanogaster totivirus SW - 2009a (4841–6706) | 268053723 | DmV-SW-2009a |
| Armigeres subalbatus virus SaX06-AK20 (5145–7430) | 309259994 | AsV-SaX06-AK20 |
| GLV-like | ||
| Piscine myocarditis virus AL V-708 (3114–5294) | 336042307 | PMV-AL V-708 |
| Giardia canis virus from China (2883–5981) | 78217291 | GCV |
| Giardia lamblia virus (2880–5978) | 20143439 | GLV2 |
| ZbV-Z Like | ||
| Blueberry latent virus isolate AR (936–3332) | 308097100 | BLV |
| Southern tomato virus isolate Mexico-1(1039–3327) | 133776995 | STV |
| Zygosaccharomyces bailii virus Z (1106–3037) | 20889374 | ZbV-Z |
| ScV-like | ||
| Ustilago maydis virus H1 | 20564172 | UmV-H1 |
| Saccharomyces cerevisiae virus L-BC (La) (1970–4561) | 9627980 | ScV L-Bc |
| Saccharomyces cerevisiae virus L-A (2351–4546) | 20428567 | ScV L-A |
| Black raspberry virus F (2565–5009) | 157939583 | BRV-F |
| Tuber aestivum virus 1 (2169–4556) | 312233874 | TaV-1 |
| GaRV-like | ||
| Sphaeropsis sapinea RNA virus 2 (2658–5135) | 3808226 | SphaeroV |
| Coniothyrium minitans RNA virus (2386–4875) | 78762702 | CmRV |
| Epichloe festucae virus 1 (2568–5051) | 94536498 | EpiFesV |
| Gremmeniella abietina RNA virus L2 (2599–5076) | 49036574 | GaRV-L2 |
| Other sequence | ||
| Eimeria brunetti RNA virus 1(2667–5321) | NP_108651 | EbRV-1 |
Accession codes correspond to nucleotide sequences of complete genomes. Numbers in brackets correspond to first and last nucleotides of RdRp coding sequences.