Table 1.
Primer Sets Used for the Quantitative Polymerase Chain Reaction Assays
Target | Forward primer sequence | Forward primer sequence | Size (bp) | Reference |
---|---|---|---|---|
Pathogens | ||||
Salmonella enterica ser. Typhimurium (ATCC 14028, ΔInvA) | TGT TGT GGT TAA TAA CCG CA | CAC AAA TCC ATC TCT GGA | 572 | Ziemer et al. [32] |
Salmonella enterica ser. Heidelberg (ATCC 8326, BCW_89) | TGT TGT GGT TAA TAA CCG CA | CAC AAA TCC ATC TCT GGA | 572 | Ziemer et al. [32] |
Salmonella enterica ser. Typhimurium LT2, Enteritidis W12 (BCW_1342, BCW_4673) | ACG CGG TAT CAT CAA AGT GG | ATC GGG TGG ATC AGG GTA AC | 402 | This study |
Escherichia coli K12 | ACG CCT TAG CCC GCG TCA AC | CGC TAG CTG CGC GTT CAG CT | 162 | This study |
E. coli 0157:H7 | GTC ACA GTA ACA AAC CGT AAC A | TCG TTG ACT ACT TCT TAT CTG GA | 95 | Fukushima et al. [33] |
Listeria monocytogenes EGDe | CTC AAA TAC GAA TGC TAA CCA AGG T | TTT GAG CTT GAG CAA TAA TAG CAC TT | 80 | Chen et al. [34] |
Probiotics | ||||
Lactobacillus acidophilus NCFM | TGG AAA CAG RTG CTA ATA CCG | GTC CAT TGT GGA AGA TTC CC | 232 | Ivanova et al. [35] |
Lactococcus lactis ssp. Cremoris Sk11 | GCG GCG TGG CTA ATA CAT GC | CTG CTG CGT CCC GTA GGA GT | 325 | Klijn et al. [36] |
Bifidobacterium infantis | ACT ACC CCT GGC CTG AAC TT | GAC AGA GCG TAA CCC AGC TC | 287 | This study |
Bifodobacterium longum | CTC CTG GAA ACG GGT GG | GGT GTT CTT CCC GAT ATC TAC A | 550 | Junick et al. [37] |
Canine targets | ||||
GAPDH | CATGTTTGTGATGGGCGTGAACCA | TTTGGCTAGAGGAGCCAAGCAGTT | 100 | This study |
IL1β | CTTTGAAGAACCTATCATCTG | GAGTTAGACAGCACCAGG | 122 | Kiczak et al. [38] |
IL6 | ACAATTCACCTCATCCTGCGGAGT | TCTGACTGGAGAAAGGAATGCCCA | 124 | This study |
IL8 | ACTTCCAAGCTGGCTGTTGC | GGCCACTGTCAATCACTCTC | 172 | De Bruint et al. [39] |
COX2 | TGCCTGGTCTGATGATGTATGCCA | TCCCATTCTGGGTGCTCCTGTTTA | 88 | This study |
TGFβ | GGAGCAGCATGTGGAGCTGTA | GCCTCACGACTCCAGTGACATC | 125 | Qiagen NM_001003309 |
IDO | CACCGAGCCCATAAAGAGTT | GCAGTTTGGAGTTGCCTTTC | 109 | This study |
HGF | GGACCATGTGAGGGAGATTATG | CATCCACGACCAGGAACAA | 92 | This study |
PPARγ | CATAAAGTCCTTCCCGCTGA | ACCTCTTTGCTCTGCTCCTG | 165 | This study |
NFκβ | TGCACCTAGCTGCCAAAGAAGGA | TCTGCTCCTGCTGCTTTGAGAA | 376 | Tang et al. [40] |