Table 1. miRNAs altered post- DENV2 exposure.
miRNA LogFC. Table lists miRNA sequence, length and edgeR output, log fold-change, and p value.
| miRNA | Sequence | nt # | Control* | DENV2* | Total count | logFC | p Value |
|---|---|---|---|---|---|---|---|
| mir-iab(2d) | ACGUAUACUGAAUGUAUCCUGAG | 23 | 7141 | 2435 | 9576 | −1.09 | 0.024 |
| bantam-3p(9d) | GAGAUCAUUUUGAAAGCUGAUUU | 23 | 52496 | 18229 | 70725 | −1.84 | 0.014 |
| let-7(9d) | UGAGGUAGUUGGUUGUAUAG | 20 | 10298 | 4193 | 14491 | −1.61 | 0.025 |
| mir-1000-5p(9d) | AUAUUGUCCUGUCACAGCAGU | 21 | 3132 | 1415 | 4547 | −1.46 | 0.015 |
| mir-1175-3p(9d) | GAGAUUCUACUUCUCCGACUUAA | 23 | 8961 | 1899 | 10860 | −2.55 | 0.001 |
| mir-124-5p(9d) | UAAGGCACGCGGUGAAUGCC | 20 | 6425 | 2912 | 9337 | −1.46 | 0.025 |
| mir-1890-5p(9d) | GAAAUCUUUGAUUAGGUCUGG | 21 | 904 | 414 | 1318 | −1.44 | 0.030 |
| mir-210-5p(9d) | UUGUGCGUGUGACAACGG | 18 | 1423 | 371 | 1794 | −2.25 | 0.006 |
| mir-276-5p(9d) | AGCGAGGUAUAGAGUUCCUAU | 21 | 7334 | 2374 | 9708 | −1.94 | 0.017 |
| mir-281a-3p(9d) | UGUCAUGGAAUUGCUCUCUUUAC | 23 | 11068 | 4666 | 15734 | −1.56 | 0.026 |
| mir-281a-5p(9d) | AAGAGAGCUAUCCGUCGACAGUA | 23 | 57847 | 38449 | 96296 | −0.91 | 0.038 |
| mir-281b-3p(9d) | UGUCAUGGAAUUGCUCUCUUGAU | 23 | 4926 | 1940 | 6866 | −1.66 | 0.012 |
| mir-281c-5p(2d) | AGAGAGCUAUCCGUCGACAGUAU | 23 | 15153 | 6250 | 21403 | −0.81 | 0.049 |
| mir-2945-5p(4d) | UGACUAGAGGCAGACUCG | 18 | 419 | 331 | 750 | −1.35 | 0.037 |
| mir-2945-5p(9d) | GACUAGAGGCAGACUCGUUUAGG | 23 | 9068 | 2046 | 11114 | −2.46 | 0.004 |
| mir-2b-5p(9d) | AUCACAGCCAGCUUUGUA | 18 | 1655 | 814 | 2469 | −1.34 | 0.046 |
| mir-305-5p(9d) | AUUGUACUUCAUCAGGUG | 18 | 2383 | 857 | 3240 | −1.79 | 0.015 |
| mir-308-3p(9d) | AUCACAGGAGUAUACUGUGA | 20 | 320 | 78 | 398 | −2.35 | 0.021 |
| mir-317-5p(9d) | GAACACAGCUGGUGGUAUCUUG | 22 | 10870 | 4919 | 15789 | −1.46 | 0.046 |
| mir-33-5p(9d) | GUGCAUUGUAGUUGCAUUGC | 20 | 1327 | 455 | 1782 | −1.86 | 0.015 |
| mir-3368-5p(4d) | UCAGUCUUUUAGAGAAGAAG | 20 | 233 | 64 | 297 | −2.6 | 0.001 |
| mir-34-3p(9d) | AACCACUAUCCGCCCUGCCGCC | 22 | 6838 | 25628 | 32466 | 1.59 | 0.027 |
| mir-3722-5p(2d) | CGAUUCGAGGUGgCGGUUUC | 20 | 15 | 1 | 16 | −3.19 | 0.047 |
| mir-4275-5p(2d) | CCAAUUACCACUucUUUUU | 19 | 488 | 73 | 561 | −2.27 | 0.020 |
| mir-5108-5p(4d) | GGUAGAGCACUGGAUGGUU | 19 | 269 | 82 | 351 | −1.91 | 0.031 |
| mir-5119-5p(2d) | CAUCUCAUCCUGGGGCUG | 18 | 10 | 46 | 56 | 2.632 | 0.008 |
| mir-79a-3p(9d) | AUAAAGCUAGAUUACCAAAGCAU | 23 | 2436 | 591 | 3027 | −2.36 | 0.001 |
| mir-79b-3p(9d) | UAAAGCUAGAUUACCAAAGCAUA | 23 | 573 | 166 | 739 | −2.1 | 0.010 |
| mir-79c-3p(9d) | UAAAGCUAGAUUACCAAAGCAUG | 23 | 159 | 49 | 208 | −2.01 | 0.006 |
| mir-8-5p(9d) | AAUACUGUCAGGUAAAGAUGUCU | 23 | 86028 | 36245 | 122273 | −1.56 | 0.023 |
| mir-87-5p(9d) | UGAGCAANNUUUCAGGUGUGCG | 22 | 426 | 2192 | 2618 | 2.047 | 0.002 |
| mir-932-5p(9d) | UCAAUUCCGUAGUGCAUUGCAG | 22 | 3179 | 892 | 4071 | −2.15 | 0.001 |
| mir-988-5p(9d) | CCCCUUGUUGCAAACCUCACGC | 22 | 78319 | 312139 | 390458 | 1.679 | 0.026 |
| mir-999-5p(9d) | GUUAACUGUAAGACUGUGUCUCG | 23 | 1015 | 258 | 1273 | −2.29 | 0.009 |
| mir-9c-5p(9d) | UCUUUGGUAUUCUAGCUGUAGA | 22 | 1505 | 812 | 2317 | −1.21 | 0.041 |
*
Counts are totaled across sequencing libraries