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. Author manuscript; available in PMC: 2015 Jan 1.
Published in final edited form as: Int J Bioinform Res Appl. 2014;10(4):479–497. doi: 10.1504/IJBRA.2014.062996

Figure 4.

Figure 4

The expression profile of genes clustered in C19 and the consensus structure and multiple alignments of their conserved 3′-UTR RNA elements. (a) FlyAtlas expression levels of the genes clustered in C19 in different tissues. (This figure is generated by searching FlyMine with all genes that are clustered in C19.) A majority (11) of these genes are highly expressed in fly testis, while no similar pattern can be observed for the other tissues. (b) The ‘cup’ or ‘comet’ localisation patterns of four genes identified by 3′-UTR RNA clustering in fly testes. These four images were created in the laboratory of Dr. Helen White-Cooper, are copyright © Helen White-Cooper and were first published in FlyTED, the Drosophila Testis gene Expression Database (http://flyted.zoo.ox.ac.uk/), from which these copies were obtained. (c) The consensus secondary structure and multiple alignments of the 3′-UTR RNA elements of the four genes that are shown in (b) and two high-score hits that have been identified by searching the secondary structure profile against 3′-UTR of Drosophila melanogaster genome using cmsearch