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. 2004 Apr;186(8):2225–2235. doi: 10.1128/JB.186.8.2225-2235.2004

TABLE 5.

Comparison of various HCH degradative genes and IS6100 in S. paucimobilis B90A, UT26, and Sp+a

Gene No. of nucleotides (no. of amino acids in):
G+C content (%) in:
Functionb Stability in:c
Strain B90A Strain UT26 Strain Sp+ Strain B90A Strain UT26 Strain Sp+ Strain B90A Strain UT26 Strain Sp+
linA1 462 (154) NDd 462 (154) 52.7 ND 52.7 Dehydrochlorinase ++ ND
linA2/linA 468 (156) 468 (156) ND 53.9 53.9 ND Dehydrochlorinase ++ + ND
linB 888 (296) 888 (296) 888 (296) 62.5 62.5 62.5 Halidohydrolase ++ +
linC 750 (250) 750 (250) 750 (250) 64.5 64.5 64.5 Dehydrogenase ++ +
linD 1,038 (346) 1,038 (346) 1,038 (346) 61.8 61.8 61.8 Reductive dechlorinase + + ++
linE 963 (321) 963 (321) 963 (321) 60.1 60.1 60.1 Ring cleavage dioxygenase + + ++
linR 909 (303) 909 (303) 909 (303) 60.3 61.3 60.3 Transcriptional regulator + + +
linX1 750 (250) 750 (250) 750 (250) 64.5 64.5 64.5 Dehydrogenase ++ + +
linX2 750 (250) ND ND 64.5 ND ND Dehydrogenase ++ ND ND
linX3 750 (250) ND ND 64.5 ND ND Dehydrogenase ++ ND ND
tnpA 792 (264) 792 (264) 792 (264) 61 61 61 Transposase + nde
a

Summary of data presented in this paper and references 14 and 20.

b

The functions of lin genes are based on the data from previous work (14) and on the data for corresponding lin genes of UT26 (20).

c

++, highly stable; +, stable; −, unstable.

d

ND, not detected.

e

nd, not determined.