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. Author manuscript; available in PMC: 2015 Sep 1.
Published in final edited form as: Hepatology. 2014 Jul 25;60(3):896–907. doi: 10.1002/hep.27050

Table 3.

Characteristics of mathematical approaches for data analysis.

Panel A
Sensitivity Specificity
MOCA 67% 96%
Random Forest 76% 88%
SVM 65% 90%
Panel B
miR Mean Threshold
126 74.17 221.88
618 13.3 26.29
31 428.02 811.93
222 35.63 60.88
16 70.91 144.76
486-3p 46.78 82.30
484 29.26 54.49
19b 66.34 135.98
191 5.17 9.23
19a 41.40 85.70
1274b 61.00 165.87
Panel C
Sensitivity Specificity
191 U 486-3p U 1274b U 16 U 484 67% 96%
191 U 486-3p U 1274b U 16 65% 96%
191 U 486-3p U 1274b 59% 96%
191 U 486-3p 57% 96%

Panel A shows the predictive value achieved from each of three distinct mathematical approaches. The statistical Sensitivity and Specificity of CCA diagnosis achieved using selected miR species using the MOCA algorithm, SVM and RF. Panel B displays 11 differentially expressed miRs selected for analysis of predictive value. The table displays the 11 miR species, the Mean expression across 96 samples for that miR, and the Threshold above which a sample would be classified as CCA by MOCA. In all cases, the threshold is significantly greater than the mean across all samples for the corresponding miR. Panel C displays markers comprising five, four, three, or two miR species and corresponding predictive value. The statistical Sensitivity and Specificity of CCA classification achieved by four, representative multi-miR markers. Multi-miR markers were combined using the union (U) Boolean set operation.