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. 2014 May 27;46(15):547–559. doi: 10.1152/physiolgenomics.00009.2014

Table 6.

Biological processes and molecular functions modeled by commonly upregulated genes by both CORT to 130 days and maturation to term

ID Genes in Gene Set and Category/Total Genes in Category, n Adj. P Value
Biological Process
Positive regulation of JAK-STAT cascade GO:0046427 7/51 0.0021
Regulation of digestive system process GO:0044058 4/20 0.0077
Cytokine-mediated signaling pathway GO:0019221 15/339 0.0077
Positive regulation of cell activation GO:0050867 12/241 0.0077
Elevation of cytosolic calcium ion concentration GO:0007204 10/172 0.0077
Gland development GO:0048732 13/277 0.0077
Cardiovascular system development GO:0072358 23/754 0.0124
Cell communication GO:0007154 88/4,770 0.0124
Inositol trisphosphate biosynthetic process GO:0032959 3/9 0.0124
Negative regulation of transcription from RNA polymerase II promoter GO:0000122 17/485 0.0167
Polyol biosynthetic process GO:0046173 4/24 0.0167
Positive regulation of muscle contraction GO:0045933 4/26 0.0189
Paraxial mesoderm morphogenesis GO:0048340 3/11 0.0189
Response to drug GO:0042493 14/371 0.0206
Response to anoxia GO:0034059 2/3 0.0206
Endocrine system development GO:0035270 8/136 0.0206
Regulation of hormone levels GO:0010817 14/378 0.0242
Molecular Function
Chromatin binding GO:0003682 17/315 0.0002
Cytokine receptor binding GO:0005126 11/214 0.0042
G protein-coupled peptide receptor activity GO:0008528 8/117 0.0042
Transcription regulatory region sequence-specific DNA binding GO:0000976 9/143 0.0042
Core promoter proximal region sequence-specific DNA binding GO:0000987 5/35 0.0042
Protein-hormone receptor activity GO:0016500 3/11 0.008
Co-SMAD binding GO:0070410 3/11 0.008
chemokine receptor activity GO:0004950 4/25 0.008
Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as 1 donor, and incorporation of 1 atom of oxygen GO:0016716 2/3 0.0098
Transforming growth factor-β receptor, pathway-specific cytoplasmic mediator activity GO:0030618 2/5 0.0212
tRNA (guanine) methyltransferase activity GO:0016423 2/5 0.0212
R-SMAD binding GO:0070412 3/18 0.0212
Phosphodiesterase I activity GO:0004528 2/5 0.0212
Protein dimerization activity GO:0046983 24/972 0.0212
RNA polymerase II regulatory region sequence-specific DNA binding GO:0000977 5/73 0.0274
Type I transforming growth factor-β receptor binding GO:0034713 2/7 0.0334
RNA polymerase II activating transcription factor binding GO:0001102 3/25 0.0356
Structure-specific DNA binding GO:0043566 8/195 0.0356
E-box binding GO:0070888 3/28 0.0439
RNA polymerase II transcription factor binding transcription factor activity GO:0001076 5/87 0.0439
RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription GO:0001077 4/57 0.0465
signal transducer activity GO:0004871 33/1,628 0.0465
Cellular Component
None identified in analysis