Table 1.
Nucleotide | kp, s−1 | Kd, μM | kp/Kd, μM−1⋅s−1 | D-stereoselectivity* |
Catalyzed by wild-type Polλ | ||||
D-dCTP | 2.02 ± 0.06 | 0.81 ± 0.08 | 2.5 | |
L-dCTP | (1.4 ± 0.1) × 10−4 | 0.67 ± 0.07 | 2.1 × 10−4 | 1.2 × 104 |
(–)3TC-TP | (3.0 ± 0.2) × 10−3 | 0.12 ± 0.02 | 2.5 × 10−2 | 100 |
(–)FTC-TP | (4.7 ± 0.1) × 10−3 | 0.35 ± 0.02 | 1.3 × 10−2 | 192 |
Catalyzed by the mutant R517A of Polλ | ||||
D-dCTP | (9.6 ± 0.2) × 10−4 | 0.22 ± 0.02 | 4.4 × 10−3 | |
L-dCTP | Not determined† | 36 ± 3 |
An incoming nucleotide was incorporated opposite the templating nucleotide dG in the single-nucleotide gapped DNA substrate 21-mer⋅19-mer/41-mer (SI Appendix, Fig. S1A) catalyzed by either wild-type human DNA Polλ or its mutant R517A at 37 °C.
D-stereoselectivity = (kp/Kd)D-dCTP/(kp/Kd)L-nucleotide.
No product formation was observed after 7 h.