Table 1.
Common Escherichia coli strains in human gut.
Escherichia coli strains | Samples counta | Genome size | Gene counts | Protein count | Genes by de novo assembly |
---|---|---|---|---|---|
E. coli HS | 148 | 4.6 M | 4629 | 4377 | 3606 |
E. coli UTI89 | 134 | 5.0 M | 5127 | 5017 | 3435 |
E. coli CFT073 | 125 | 5.2 M | 5579 | 5369 | 3406 |
E. coli KO11FL | 115 | 4.9 M | 4756 | 4533 | 3512 |
E. coli NA114 | 94 | 5.0 M | 4975 | 4873 | 3381 |
E. coli 536 | 90 | 4.9 M | 4779 | 4619 | 3488 |
E. coli O127:H6 str. E2348/69 | 90 | 5.0 M | 4890 | 4552 | 3179 |
aThere are 148 individual samples in the analysis.