Table 1.

The results of joint secondary structure prediction of GRNAs in MCC in comparison to the PETcofold and other joint structure prediction methods such as RNAcofold, inteRNA, Pairfold and RactIP

RNA-RNA pairs	GRNAs	PETcofold	RNAcofold	inteRNA	Pairfold	RactIP
MicA-ompA	67	87	80	49	86	57
OxyS-fhlA	60	80	61	64	61	48
RyhB-uof-fur	56	13	21	12	21	19
RyhB-sodB	74	67	65	70	65	65
Average	64	62	57	49	58	47