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. 2014 Jun 29;9:17. doi: 10.1186/1748-7188-9-17

Table 3.

The results of binding sites prediction of GRNAs in F-measure on the datasets[12,14]in comparison to inRNAs, IntaRNA, RNAup and RactIP

RNA-RNA pairs GRNAs inRNAs IntaRNA RNAup RactIP
Tar-Tar*
 100
 90.9
 90.9
 90.9
 67.7
R1inv-R2inv
 100
 87.5
 100
 87.5
 100
DIS-DIS
 100
 100
 100
 100
 76.6
CopA-CopT
 85
 85.7
 56.2
 60
 100
IncRNA54-RepZ
 82.92
 94.1
 79
 80
 90.9
DsrA-Rpos
 84.44
 79.3
 79.3
 79.3
 69.4
GcvB-argT
 93.33
 90.5
 95
 92.3
 97.4
GcvB-dppA
 96.97
 91.9
 73.9
 62.9
 72.2
GcvB-gltI
 93.62
 60
 0
 0
 100
GcvB-livK
 76.07
 55.5
 55.3
 55.3
 95.5
GcvB-livJ
 95.45
 71.7
 95.5
 95.5
 95.8
GcvB-oppA
 95.24
 84.6
 97.8
 97.8
 100
GcvB-STM4351
 83.72
 86.4
 82.6
 91.7
 93.6
IstR-tisAB
 81.96
 83.9
 91.8
 80
 78.5
MicA-ompA
 96.77
 100
 100
 100
 87.5
MicA-lamB
 86.36
 100
 90.2
 76
 68.4
MicC-ompC
 95.24
 100
 69.9
 52.4
 80
MicF-ompF
 100
 96
 96
 86.9
 80
OxyS-fhlA
 83.33
 89.7
 66.7
 54.5
 66.7
RyhB-sdhD
 72.73
 75
 74.1
 79.4
 82.4
RyhB-sodB
 100
 100
 90
 94.7
 56.3
SgrS-ptsG
 71.79
 65.1
 85
 85
 85
Spot42-galK
 72
 55.1
 50
 52.3
 69
Average 89 84.5 79.1 76.3 83.6