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. 2014 Aug 5;9(8):e104380. doi: 10.1371/journal.pone.0104380

Table 1. Salmonella enterica serovar 4,[5],12:i:- isolates used in this study.

PCR resultsa
Isolates Source Year m-PCR IS200 up-fljA fljA-fljB fljB-hin hin-down fin spvB 94 kb plasmidb Phage typec LDCd Resistance profilee
H1∼4 Human 2006 + + - - - + - + + 193 + -
H5 Human 2007 + + - - - - - - - 193 + ASSu
H6 Human 2008 + + - - - + - + + RDNC-a + -
H7 Human 2003 + + - - - + - + + 193 + -
H8 Human 2007 + + + + + + - + + 26 + -
H9∼11 Human 2007 + + - - - + - + + RDNC-a + -
H12 Human 2004 + + - - - + - - - RDNC-c + -
H13 Human 2007 + + - - - - - - - 193 + SSuT
H14 Human 2002 + + - - - - - + + UT + ASuT
C1 Cattle 2003 + + - - - + - + + RDNC-a - -
C2 Cattle 2005 + + - - - + - + + RDNC-a - -
C3∼4 Cattle 2007 + + - - - + - + + RDNC-a - -
C5∼8 Cattle 2008 + + - - - + - + + RDNC-a - -
C9∼10 Cattle 2008 + + - - - - - + + RDNC-a + A
C11 Cattle 2004 + + - - - + - + + RDNC-a + -
C12 Cattle 2005 + + - - - + - + + 120 + -
C13 Cattle 2005 + + + + + + - + + RDNC-b + -
C14 Cattle 2008 + + - - - - - - - UT + ASSuT
C15 Cattle 2007 + + - - - + - + + RDNC + -
C16 Cattle 2010 + + - - - + - + + RDNC-a + -
C17 Cattle 2010 + + - - - + - + + RDNC-b + A
S1 Swine 2008 + + - - - - - - - UT + ASSuT
S2 Swine 2009 + + - - - - - - - UT + ASSu
S3 Swine 2002 + + - - - - - - - RDNC-d + Ssu
S4 Swine 2003 + + - - - - - - - RDNC-d + SSuT
S5 Swine 2008 + + - - - - - - - 193 + SSuT
S6 Swine 2009 + + - - - - + + + 27 + ASSuT
K1 Chicken 2001 + + - - - + - + + RDNC-b + -
K2 Chicken 2004 + + - - - + - - - RDNC + -
K3 Chicken 2005 + + - - - + - - - RDNC-c + -
K4 Chicken 2006 + + - - - + - - - RDNC-c + -
K5 Chicken 2010 + + - - - + - + + RDNC + ASuT
B1 Penguin 2009 + + + + + + - + + RDNC + -
B2∼3 Crow 2000 + + + + + + - + + RDNC-e + -
B4 Parrot 2005 + + + + + + - + + RDNC-e + -
M1 Pork 2005 + + - - - + - + + RDNC-a + -
M2 Pork 2007 + + - - - + - + + RDNC-a + -
R1 River water 2007 + + + + + + - + + 26 + -
R2 River water 2007 + + - - - + - + + RDNC-a + ASu
R3 River water 2007 + + + + + + - + + 26 + -
a

m-PCR, multiplex PCR to identify S. Typhimurium [25]; IS200, PCR to identify S. Typhimurium [15]; up-fljA, boundary region of fljA and its upstream intergenic region; fljA–fljB, boundary region of fljA and fljB; fljB–hin, boundary region of fljB and hin; hin-down, boundary region of hin and its downstream intergenic region; +, positive; -,negative.

b

+, presence; -, absence.

c

RDNC, reacted but did not conform; RDNC-a–e, same letter indicates the same lysogenic patterns among RDNC isolates.

d

LDC, lysine decarboxylase; +, positive; -, negative.

e

A, ampicillin; S, streptomycin; Su, sulfamethizole; T, tetracycline; -, pansusceptible.