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. 2014 Jul 11;15(1):586. doi: 10.1186/1471-2164-15-586

Table 6.

dN/dS ratios for various OR protein domains

Family D Entire molecule
32 genes 0.44±0.10 TM1 0.28±0.18 IN1 0.36±0.33
TM2 0.24±0.23 IN2 0.69±0.72
TM3 0.64±0.46 IN3 0.26±0.26
TM4 0.83±1.01 OUT1 0.22±0.22
TM5 0.58±0.39 OUT2 1.14±1.06
TM6 0.42±0.41 OUT3 0.80±0.56
TM7 0.36±0.35
Family E Entire molecule
56 genes 0.40±0.11 TM1 0.57±0.27 IN1 0.24±0.01
TM2 0.52±0.48 IN2 0.42±0.37
TM3 0.73±0.79 IN3 0.32±0.37
TM4 0.69±0.39 OUT1 0.43±0.24
TM5 0.70±0.44 OUT2 0.30±0.23
TM6 0.23±0.21 OUT3 0.41±0.38
TM7 0.21±0.12
Family H Entire molecule
50 genes 0.41±0.13 TM1 0.56±0.47 IN1 0.35±0.24
TM2 0.24±0.22 IN2 0.23±0.15
TM3 0.48±0.43 IN3 0.34±0.24
TM4 0.53±0.39 OUT1 0.39±0.51
TM5 0.76±0.68 OUT2 0.64±0.36
TM6 0.84±0.51 OUT3 0.67±0.72
TM7 0.27±0.29
Family L Entire molecule
32 genes 0.50±0.12 TM1 0.56±0.42 IN1 0.23±0.11
TM2 0.59±0.58 IN2 0.41±0.38
TM3 0.76±0.43 IN3 0.59±0.33
TM4 1.48±1.54 OUT1 0.29±0.34
TM5 0.63±0.36 OUT2 0.35±0.22
TM6 0.72±0.42 OUT3 0.40±0.34
TM7 0.56±0.58
Family N Entire molecule
32 genes 0.39±0.14 TM1 0.45±0.35 IN1 0.57±0.35
TM2 0.79±0.37 IN2 0.60±0.55
TM3 0.68±0.57 IN3 0.41±0.33
TM4 0.95±0.54 OUT1 0.35±0.27
TM5 0.56±0.41 OUT2 0.24±0.11
TM6 0.60±0.41 OUT3 0.40±0.13
TM7 1.20±1.07

dN/dS ratios for the 7 TM regions, and the 3 external and 3 internal loops for the 4 largest families were calculated. TM regions and loops were identified with PolyPhobius.