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. 2014 Aug 4;4:5932. doi: 10.1038/srep05932

Table 2. Effect of k-mer size on assembling performance of tea transcriptome.

K-mer Total number of sequence Average length of sequence (bp) Maximum length of sequence (bp) Average coverage Number of sequence length 1000 bp and above Percentage of transcripts (1000 bp and longer)
19mer 64,696 493.95 6,984 110.71 8,237 12.731
21mer 57,767 505.44 5,828 111.28 7,996 13.841
23mer 50,433 492.56 7,403 112.11 6,725 13.334
25mer 42,916 459.40 4,848 113.73 4,967 11.573
27mer 33,293 411.41 4,198 116.35 2,762 8.296
29mer 19,677 345.39 3,266 123.92 901 4.578