Table 3.
Potential functions of the SSR-associated sequences in Pinus sylvestris var. mongolica.
| Locus | BLAST top hit accession no. | BLAST top hit description [organism] | E-value | GO_ID | Putative gene function |
| lw_isotig00542 | None | None | None | None | None |
| lw_isotig04204 | ABK21059.1 | Unknown [Picea sitchensis] | 2E-64 | None | None |
| lw_isotig04600 | XP_002273895 | PREDICTED: uncharacterized protein LOC100267221 [Vitis vinifera] | 2E-47 | None | None |
| lw_isotig06440 | None | None | None | None | None |
| lw_isotig07383 | XP_004154913 | PREDICTED: protein RCC2-like [Cucumis sativus] | 1E-25 | None | None |
| lw_isotig10603 | None | None | None | None | None |
| lw_isotig17679 | None | None | None | None | None |
| lw_isotig21953 | ADE76095.1 | Unknown [Picea sitchensis] | 7E-12 | None | None |
| lw_isotig26230 | None | None | None | None | None |
| lw_isotig27940 | None | None | None | None | None |
| lw_isotig00080 | ABA54143.1 | Putative glycine-rich protein [Picea glauca] | 1E-11 | GO:0046872 | Metal ion binding |
| GO:0008270 | Zinc ion binding | ||||
| GO:0006355 | Regulation of transcription, DNA-dependent | ||||
| GO:0003676 | Nucleic acid binding | ||||
| lw_isotig00081 | ABA54143.1 | Putative glycine-rich protein [Picea glauca] | 1E-11 | None | None |
| lw_isotig01420 | ACN39897.1 | Unknown [Picea sitchensis] | 2E-157 | GO:0055114 | Oxidation-reduction process |
| GO:0046872 | Metal ion binding | ||||
| GO:0020037 | Heme binding | ||||
| GO:0016705 | Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | ||||
| GO:0016491 | Oxidoreductase activity | ||||
| GO:0009055 | Electron carrier activity | ||||
| GO:0005506 | Iron ion binding | ||||
| lw_isotig02138 | XP_002971210.1 | Hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii] | 3E-107 | GO:0046872 | Metal ion binding |
| lw_isotig02347 | XP_002990606.1 | Hypothetical protein SELMODRAFT_448108 [Selaginella moellendorffii] | 2E-57 | None | None |
| lw_isotig03088 | XP_002266814.1 | PREDICTED: CCA-adding enzyme [Vitis vinifera] | 1E-118 | GO:0016779 | Nucleotidyltransferase activity |
| GO:0006396 | RNA processing | ||||
| GO:0003723 | RNA binding | ||||
| lw_isotig04931 | ABR16534.1 | Unknown [Picea sitchensis] | 2E-143 | None | None |
| lw_isotig02842 | ADE76527.1 | Unknown [Picea sitchensis] | 0 | None | None |
| lw_isotig04195 | ABK21301.1 | Unknown [Picea sitchensis] | 7E-80 | None | None |
| lw_isotig04306 | ABR17562.1 | Unknown [Picea sitchensis] | 1E-79 | None | None |
| lw_isotig05123 | ABK22664.1 | Unknown [Picea sitchensis] | 6E-165 | None | None |
| lw_isotig06215 | ABQ51222.1 | R2R3-MYB transcription factor MYB6 [Picea glauca] | 1E-127 | GO:0006355 | Regulation of transcription, DNA-dependent |
| GO:0005634 | Nucleus | ||||
| lw_isotig11166 | ABK23767.1 | Unknown [Picea sitchensis] | 2E-23 | GO:0009055 | Electron carrier activity |
| lw_isotig12667 | None | None | None | None | None |
| lw_isotig20215 | DAA51826.1 | TPA: hypothetical protein ZEAMMB73_014853 [Zea mays] | 2E-14 | GO:0055114 | Oxidation-reduction process |
| GO:0051536 | Iron-sulfur cluster binding | ||||
| GO:0050660 | Flavin adenine dinucleotide binding | ||||
| GO:0046872 | Metal ion binding | ||||
| GO:0016614 | Oxidoreductase activity, acting on CH-OH group of donors | ||||
| GO:0016491 | Oxidoreductase activity | ||||
| GO:0009055 | Electron carrier activity | ||||
| GO:0005506 | Iron ion binding | ||||
| GO:0003824 | Catalytic activity |