Table 2.
Main characteristics of transcripts exhibiting an absolute value of log 2 fold change ≥ 3.0 between the two infection conditions
Functional category | Number | Percentage | Main tendancy* |
---|---|---|---|
Defense associated proteins | 37 | 5.7 | I (35/37) |
Proteins involved in oxidative burst/redox status | 17 | 2.6 | I (14/17) |
Cytochrome P450s | 17 | 2.6 | I (16/17) |
UDP-glycosyltranferases | 16 | 2.5 | I (16/16) |
Glutathion-S-tranferases | 9 | 1.4 | I (8/9) |
Transport | 24 | 3.7 | I (22/24) |
Amino acid metabolism | 11 | 1.7 | I (11/11) |
Hormones synthesis and response | 35 | 5.4 | I (34/35) |
Secondary metabolism | 10 | 1.5 | I (10/10) |
Ubiquitination | 12 | 1.8 | I (12/12) |
Signal transduction | 96 | 14.8 | I (95/96) |
Regulatory proteins | 77 | 11.8 | I (72/77) |
Photosynthesis | 22 | 3.4 | R (18/22) |
Translation/Ribosomes | 12 | 1.9 | I (10/12) |
Lipid metabolism | 7 | 1.1 | I (6/7) |
General metabolism | 7 | 1.1 | R (5/7) |
Miscellaneous | 102 | 15.5 | I (87/102) |
Unknown proteins | 139 | 21.5 | I (128/139) |
Total | 650 | 100 |
*Numbers in brackets represent the number of transcripts showing induction (I) or repression (R) among the total number of transcripts in each functional category.