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. 2014 Aug 7;10(8):e1004554. doi: 10.1371/journal.pgen.1004554

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© 2014 Al-Bassam et al

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

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A. The MEME-predicted non-palindromic Group-II consensus sequence. The height of the letters in the sequence logo, in bits, is proportional to the frequency of the A, C, T, or G nucleotides at each position of the motif. B. DNase I footprinting analysis of BldM-WhiI, BldM and GST-WhiI binding to two Group-II promoters (sven1263 and murA2). The protein concentrations used were 100 and 200 nM. G+A indicates the Maxam and Gilbert sequence ladder. The protected regions are indicated by dotted lines and the positions of the MEME-predicted binding motifs are shown.