Table 2. RNA purity, yield, and integrity.
Sample conditions | A260/A280 | RNA yield (µg) | RIN |
RNA extraction immediately after venipuncture | |||
Ctrl 1 | 1.96±0.06 | 2.91±1.44 | 9.56±0.22 |
Ctrl 2 | 1.96±0.07 | 3.00±1.51 | 9.59±0.25 |
RNA extraction after freezing for over 24 h | |||
Without stab | 1.97±0.06 | 2.93±1.16 | 8.44±1.00** |
Later | 1.60±0.14*** | 0.31±0.08$ ,** | N.A. |
Protect | 1.92±0.05** | 2.06±0.63 | 7.66±0.33*** |
Lock | 1.99±0.04* | 1.73±0.62* | 9.57±0.31 |
Shield | 1.87±0.10*** | 0.93±0.53# ,** | N.A. |
Stab | 2.02±0.04*** | 2.91±1.29 | 9.45±0.65 |
SDS | 1.97±0.05 | 2.14±0.97* | 5.93±1.93*** |
1-Thio | 1.99±0.04** | 2.56±0.98 | 9.74±0.17* |
RNA purity, yield, and integrity were measured for 11 individual samples. A260/A280 indicates the ratio of absorbance at 260 and 280 nm.
N.A.: not available (not measureable), RIN: RNA integrity number.
*p<0.05; **p<0.01; ***p<0.001 (Wilcoxon signed rank test).
RNA yield could be measured for nine individual samples (failed in two samples).
RNA yield could be measured for 10 individual samples (failed in one sample).