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. Author manuscript; available in PMC: 2014 Aug 8.
Published in final edited form as: NMR Biomed. 2012 Jan 26;25(9):1033–1042. doi: 10.1002/nbm.2766

Table 1.

Sense (S) and antisense (AS) primer sequences used for qRT-PCR of GDPD1-5

Gene Cell lines Tumor samples from patients
GDPD1-S 5’-GAGCTTCTGTGGGAGTACGG-3’ 5’-AAGCAGCGATTCCTCAGTA-3’
GDPD1-AS 5’-CGCAGGAAGAAGATGGAGAG-3’ 5’-AGTCCAATTCTAGCATATCAGTTC-3’
GDPD2-S 5’-TGCTGCTGACAAGGATCAAC-3’ 5’-ACTGTGTTTGAGACTGAT-3’
GDPD2-AS 5’-CCCCTGAAGCATTCCACTTA-3’ 5’-GGAATACAGAGGCTACAT-3’
GDPD3-S 5’-CCACACACCATGTCCAGAAG-3’ 5’-TTCGTGAGACGCTATGAC-3’
GDPD3-AS 5’-GAATGCCTCGAGCAGTTAGG-3’ 5’-ATCCTCGGCTTATTGTGAA-3’
GDPD4-S 5’-CCCAAGAGTGGAAAGGAACA-3’ 5’-TCAGCATAACTGTGATGGT-3’
GDPD4-AS 5’-GCTTCAAAGGTGTGACAGCA-3’ 5’-CACTTGTAGACCTCTTAACCT-3’
GDPD5-S 5’-AGCAGTCACCATGCTCTCCT-3’ 5’-CTACAACCCTGAGCAGAT-3’
GDPD5-AS 5’-AAACACCACGGTGAAGAAGG-3’ 5’-AACATACGGAGAGCACAT-3’
CHKA-S 5’-GATCCGAACAAGCTCAGAAAGAAAATG-3’ 5’-GATCCGAACAAGCTCAGAAAGAAAATG-3’
CHKA-AS 5’-CGGCTCGGGATGAACTGCTC-3’ 5’-CGGCTCGGGATGAACTGCTC-3’
PLD1-S - 5’-ATGGAATCCGAATTGATAATCTT-3’
PLD1-AS 5’-AGCATTCTCTTGGATAGCA-3’

Housekeeping genes
36B4-S 5’-GATTGGCTACCCAACTGTTGCA-3’
36B4-AS 5’-CAGGGGCAGCAGCCACAAAGGC-3’

HPRT1-S 5’-CCTGGCGTCGTGATTAGTGATG-3’
HPRT1-AS 5’-CAGAGGGCTACAATGTGATGGC-3’

All GDPD primers were designed to be gene specific and not transcript specific.