Table 1.
Gene | Cell lines | Tumor samples from patients |
---|---|---|
GDPD1-S | 5’-GAGCTTCTGTGGGAGTACGG-3’ | 5’-AAGCAGCGATTCCTCAGTA-3’ |
GDPD1-AS | 5’-CGCAGGAAGAAGATGGAGAG-3’ | 5’-AGTCCAATTCTAGCATATCAGTTC-3’ |
GDPD2-S | 5’-TGCTGCTGACAAGGATCAAC-3’ | 5’-ACTGTGTTTGAGACTGAT-3’ |
GDPD2-AS | 5’-CCCCTGAAGCATTCCACTTA-3’ | 5’-GGAATACAGAGGCTACAT-3’ |
GDPD3-S | 5’-CCACACACCATGTCCAGAAG-3’ | 5’-TTCGTGAGACGCTATGAC-3’ |
GDPD3-AS | 5’-GAATGCCTCGAGCAGTTAGG-3’ | 5’-ATCCTCGGCTTATTGTGAA-3’ |
GDPD4-S | 5’-CCCAAGAGTGGAAAGGAACA-3’ | 5’-TCAGCATAACTGTGATGGT-3’ |
GDPD4-AS | 5’-GCTTCAAAGGTGTGACAGCA-3’ | 5’-CACTTGTAGACCTCTTAACCT-3’ |
GDPD5-S | 5’-AGCAGTCACCATGCTCTCCT-3’ | 5’-CTACAACCCTGAGCAGAT-3’ |
GDPD5-AS | 5’-AAACACCACGGTGAAGAAGG-3’ | 5’-AACATACGGAGAGCACAT-3’ |
CHKA-S | 5’-GATCCGAACAAGCTCAGAAAGAAAATG-3’ | 5’-GATCCGAACAAGCTCAGAAAGAAAATG-3’ |
CHKA-AS | 5’-CGGCTCGGGATGAACTGCTC-3’ | 5’-CGGCTCGGGATGAACTGCTC-3’ |
PLD1-S | - | 5’-ATGGAATCCGAATTGATAATCTT-3’ |
PLD1-AS | 5’-AGCATTCTCTTGGATAGCA-3’ | |
| ||
Housekeeping genes
| ||
36B4-S | 5’-GATTGGCTACCCAACTGTTGCA-3’ | |
36B4-AS | 5’-CAGGGGCAGCAGCCACAAAGGC-3’ | |
| ||
HPRT1-S | 5’-CCTGGCGTCGTGATTAGTGATG-3’ | |
HPRT1-AS | 5’-CAGAGGGCTACAATGTGATGGC-3’ |
All GDPD primers were designed to be gene specific and not transcript specific.