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. 2014 Aug 8;9(8):e103900. doi: 10.1371/journal.pone.0103900

Table 3. Reference genes and their primer sequences used for real-time PCR.

Abbreviation Gene name Accession No. Primer forward(F)/reverse(R) Primer reverse Amplicon size (bp) Eb (%) R2 b
ACT Actin CV049956.1 ACATTGTTCTTAGTGGTGGGTC AGATTCGTCATACTCTGCCTTT 209 100.5±4.8 0.994
TUA Alpha-tubulin CV046479.1 TTGACATTGAGCGACCCACC TCACATCCACATTCAGAGCACC 108 100.5±2.8 0.997
TUB Beta-tubulin CV045221.1 CTTGACAATGAAGCCCTCTATGA AGTAAGAGGAGCAAAGCCCAC 219 104.6±5.7 0.995
CYP Cyclophilin CV046015.1 CAACGGATCTCAGTTCTTCGTCTGC GACCCAACCTTCTCGATGTTCTTCA 120 101.8±2.1 0.998
DNAj Chaperone protein dnaJ CV052151.1 GGTGGACACGACCCATTTGA ACCTGACTTTGACCCTTTACCC 219 105.1±4.7 0.998
ELFA Elongation factor 1-alpha CV046439.1 ACTGGAACCTCACAGGCTGAC GGAGTAGTGGCATCCATCTTGTTA 170 105.9±3.6 0.993
F-box 27 F-box protein 27 EU836687.1 CGTGGAGTGATTTGATTGGC AAGTTTGGGTGGTGGAGGC 106 99.8±5.5 0.997
GAPDH Glyceraldehyde-3-phosphate JN786944.1 ATGTCTTTCCGTGTTCCTACTGT TTTCCCTCAGACTCCTCCTTG 116 100.4±3.5 0.993
RPL12 Ribosomal protein L12 U93168.1 CGATCCCTCACAGGTCGTCG TCCAGTCGTTGGCGGTCTCC 149 99.2±3.3 0.990
UBC Ubiquitin-conjugating enzyme AF008910.1 GAGACCAGCAATAACCGTGAA TCTTGTACTCCGTGGCATCCT 128 99.2±4.2 0.997
UBQ Polyubiquitin CB821710.1 CTCTGACTGGCAAGACCATAACA CCACGGAGACGAAGGACAA 205 102.0±1.9 0.998
b

PCR efficiency (E) and correlation coefficients (R2) were calculated by LinRegPCR method.