Table 2.
Molecular Subgroup | Gene Pair | Trend in Mutation Pattern § | p-value§ |
---|---|---|---|
Hypermutated/MSI | ARID5B-ZFHX3 | Co-occurrence | 0.035 |
CTCF-FGFR2 | Co-occurrence | 0.025 | |
FBXW7-LIMCH1 | Co-occurrence | 0.021 | |
BCOR- PPP2R1A | Co-occurrence | 0.006 | |
HIST1H2BD -RPL22 | Co-occurrence | 0.005 | |
SPOP-RPL22 | Co-occurrence | 0.016 | |
SPOP-CCND1 | Co-occurrence | 0.005 | |
SPOP-PPP2R1A | Co-occurrence | 0.040 | |
MECOM-PPP2R1A | Co-occurrence | 0.021 | |
MECOM-ATR | Co-occurrence | 0.0004 | |
METTL14-FGFR2 | Co-occurrence | 0.048 | |
METTL14-PPP2R1A | Co-occurrence | 0.021 | |
SGK1-RBMX | Co-occurrence | 0.013 | |
TNFAIP6-MECOM | Co-occurrence | 0.046 | |
TNFAIP6-METTL14 | Co-occurrence | 0.046 | |
Copy number low/MSS | SPOP-PTEN | Mutual exclusivity | 0.029 |
SOX17-CTNNB1 | Mutual exclusivity | 0.043 | |
FBXW7-CTNNB1 | Mutual exclusivity | 0.022 | |
FBXW7-SOX17 | Co-occurrence | 0.047 | |
MECOM-PIK3R1 | Co-occurrence | 0.011 | |
Copy number high/serous-like | CHD4-FBXW7 | Co-occurrence | 0.009 |
GIGYF2-TP53 | Mutual exclusivity | 0.001 | |
Ultramutated | ZFHX3-PIK3CA | Co-occurrence | 0.015 |
ZFHX3-ATR | Co-occurrence | 0.029 | |
GIGYF2-CSDE1 | Co-occurrence | 0.004 | |
SGK1-CTNNB1 | Co-occurrence | 0.017 | |
ATR-CTNNB1 | Co-occurrence | 0.017 | |
CSDE1-FGFR2 | Co-occurrence | 0.041 | |
GIGYF2-FGFR2 | Co-occurrence | 0.041 | |
LIMCH1-PPP2R1A | Co-occurrence | 0.020 | |
SPOP-KRAS | Mutual exclusivity | 0.009 | |
RBMX-KRAS | Mutual exclusivity | 0.029 | |
CCND1-RPL22 | Co-occurrence | 0.014 |