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. 2014 Aug 11;9(8):e104313. doi: 10.1371/journal.pone.0104313

Table 4. Primers used in this study.

GenBank accession number Gene symbol Gene Description Primer name Primer sequence Purpose Amplicon size (bp)
YP_111519.1 BPSS1512 Hypothetical protein BPSS1512-F GGACAAACGCTGGAAGTGAT Internal region 129
YP_111519.1 BPSS1512 Hypothetical protein BPSS1512-R GTTCAGAAAGAACGCCTTGG Internal region 129
YP_111526.1 BPSS1520 AraC family transcriptional regulator BPSS1520-F GGACGAGCTCGATTACATGC Internal region 153
YP_111526.1 BPSS1520 AraC family transcriptional regulator BPSS1520-R GGCAGATGAAGATGCTGCTC Internal region 153
YP_111527.1 BPSS1521 Hypothetical protein BPSS1521-F TCGATCTTCTCGCTGACCTC Internal region 100
YP_111527.1 BPSS1521 Hypothetical protein BPSS1521-R TCAAGGAGATCCGCTTCAAC Internal region 100
YP_111527.1 BPSS1521 Hypothetical protein bprD-PFUp TTAATTTCTAGAGCATCGGAGCAACAAGAATC Upstream BPSS1521 927
YP_111527.1 BPSS1521 Hypothetical protein bprD-PRUp TTATGAAGATCTTTTCCTGTCGTGAACATTGG Upstream BPSS1521 927
YP_111527.1 BPSS1521 Hypothetical protein bprD-PFDown TTGTCAAGATCTGCGTAACGTGTGACGTGTTG Downstream BPSS1521 929
YP_111527.1 BPSS1521 Hypothetical protein bprD-PRDown ATAATACCCGGGGATGAAGATGCTGCTCGATG Downstream BPSS1521 929
YP_111527.1 BPSS1521 Hypothetical protein bprD-PFComp ATACTTGGTACCAGGAAAGACATCATGAAGCTC Full-length BPSS1521 456
YP_111527.1 BPSS1521 Hypothetical protein bprD-PRComp TTAACATCTAGATCACGGCGCCGGGCGCTG Full-length BPSS1521 456
AY_305818.1 16S ribosomal RNA 16s rRNA-F GGCTAATACCCGGAGTGGA Internal region 194
AY_305818.1 16S ribosomal RNA 16s rRNA-R CTAGCCTGCCAGTCACCAA Internal region 194
YP_111503.1 BPSS1496 Hypothetical protein BPSS1496-F AGCGGGTCAACATCGTCTAT Internal region 163
YP_111503.1 BPSS1496 Hypothetical protein BPSS1496-R ACGTCGTTGAAGTCGTCCTT Internal region 163
YP_111504.1 BPSS1497 Hypothetical protein BPSS1497-F GCTCGCTGAAGTTTCTCGTC Internal region 151
YP_111504.1 BPSS1497 Hypothetical protein BPSS1497-R TCGGCCGTATAGACCTTCTG Internal region 151
YP_111505.1 BPSS1498 Hypothetical protein BPSS1497-F GTCATGACGGGAAAATCCAC Internal region 134
YP_111505.1 BPSS1498 Hypothetical protein BPSS1497-R CGACGATCTGTCCATTTCCT Internal region 134
pDM4 BAP3771 TAACGGCAAAAGCACCGCCGGACATCA pDM4 MCS flanking region 177
pDM4 BAP3772 ACATGTGGAATTGTGAGCGGATAACAA pDM4 MCS flanking region 177
Tcr cassette BAP5118 GCGTAGTCGATAGTGGCTCC Internal region
Tcr cassette BAP5116 ATCAGGGACAGCTTCAAGGA Internal region

MCS, multiple cloning site.