Table 2.
SNP frequencies in cohort II.
| Frequencies in current cohort |
||||||
|---|---|---|---|---|---|---|
| NCBI number | Gene | SNP | Phenotye | individuals (%) | individuals (n) | total (n) |
| rs1131847 | BPI | A/G | 3′ UTR | |||
| AA | 12.50% | 25 | 200 | |||
| AG | 48.50% | 97 | ||||
| GG | 39.00% | 78 | ||||
| rs1341023 | BPI | C/T | Ala16Val | |||
| CC | 22.00% | 44 | 198 | |||
| CT | 51.00% | 100 | ||||
| TT | 27.00% | 54 | ||||
| rs4358188 | BPI | A/G | Glu216Lys | |||
| AA | 26.00% | 51 | 198 | |||
| AG | 49.00% | 98 | ||||
| GG | 25.00% | 49 | ||||
| rs6099106 | BPI | C/T | intronic | |||
| CC | 13.00% | 26 | 200 | |||
| CT | 53.00% | 106 | ||||
| TT | 34.00% | 68 | ||||
| rs2569190 | CD14 | A/G | promoter region | |||
| AA | 28.00% | 54 | 192 | |||
| AG | 41.00% | 79 | ||||
| GG | 31.00% | 59 | ||||
| rs2569191 | CD14 | C/T | – | |||
| CC | 28.00% | 48 | 170 | |||
| CT | 40.00% | 68 | ||||
| TT | 32.00% | 54 | ||||
| rs2232571 | LBP | C/T | promoter region | |||
| CC | 3.00% | 6 | 194 | |||
| CT | 35.00% | 68 | ||||
| TT | 62.00% | 120 | ||||
| rs2232582 | LBP | C/T | promoter region | |||
| CC | 2.00% | 4 | 199 | |||
| CT | 30.00% | 59 | ||||
| TT | 68.00% | 136 | ||||
| rs2232613 | LBP | C/T | Pro333Leu | |||
| CC | 59.00% | 116 | 196 | |||
| CT | 37.00% | 72 | ||||
| TT | 4.00% | 8 | ||||
| rs2232618 | LBP | C/T | Phe436Leu | |||
| CC | 1.00% | 2 | 196 | |||
| CT | 15.00% | 29 | ||||
| TT | 84.00% | 165 | ||||
| rs8177374 | MAL/TIRAP | C/T | Ser180Leu | |||
| CC | 75.50% | 149 | 197 | |||
| CT | 23.00% | 45 | ||||
| TT | 1.50% | 3 | ||||
| rs6472812 | MD-2 | A/G | Gly56Arg | |||
| AA | 0.50% | 1 | 194 | |||
| AG | 8.00% | 16 | ||||
| GG | 91.50% | 177 | ||||
| rs5743708 | TLR2 | A/G | Arg753Gln | |||
| AA | 4.00% | 8 | 197 | |||
| AG | 6.00% | 11 | ||||
| GG | 90.00% | 178 | ||||
| rs1898830 | TLR2 | A/G | – | |||
| AA | 42.00% | 81 | 192 | |||
| AG | 46.00% | 89 | ||||
| GG | 12.00% | 22 | ||||
| rs1816702 | TLR2 | C/T | – | |||
| CC | 76.00% | 146 | 191 | |||
| CT | 23.50% | 44 | ||||
| TT | 0.50% | 1 | ||||
| rs4986790 | TLR4 | A/G | Asp299Gly | |||
| AA | 86.00% | 172 | 199 | |||
| AG | 13.00% | 26 | ||||
| GG | 1.00% | 1 | ||||
| rs4986791 | TLR4 | C/T | Thr399Ile | |||
| CC | 85.00% | 166 | 196 | |||
| CT | 14.00% | 29 | ||||
| TT | 1.00% | 1 | ||||