Table 3.
13-mer CCNCCNTNNCCNC Associated with Meiotic Recombination/NAHR Hotspots within and Flanking SPASTa
| Coordinate | Orientation | Within Alu? | Alu Used in CNV Breakpoint? |
|---|---|---|---|
| chr2: 32,290,968 | negative | – | – |
| chr2: 32,292,376 | positive | AluSz | Ruhr 9, Ruhr 10 |
| chr2: 32,294,873 | positive | AluY | – |
| chr2: 32,300,868 | positive | AluSz | – |
| chr2: 32,303,490 | positive | AluSz6 | A2 (complex) |
| chr2: 32,311,592 | negative | AluSx | – |
| chr2: 32,317,837 | negative | AluSx | – |
| chr2: 32,323,295 | negative | AluJr | – |
| chr2: 32,337,660 | positive | AluSg | – |
| chr2: 32,339,234 | negative | AluJo | – |
| chr2: 32,346,229 | negative | AluSx1 (overlaps) | – |
| chr2: 32,351,109 | positive | AluY | Park 3, Ruhr 31, Spain 8 |
| chr2: 32,355,085 | negative | AluJr (overlaps) | – |
| chr2: 32,360,010 | positive | AluSx | Park 3, JKF C |
| chr2: 32,371,388 | negative | AluJo | – |
| chr2: 32,375,404 | positive | AluSc | – |
| chr2: 32,378,630 | positive | AluSx1 | A3, A4, A5, A8, A9, SPAST_1 |
| chr2: 32,378,906 | negative | AluSx | A1, A39, BAB 3327 |
| chr2: 32,394,608 | negative | AluY | – |
| chr2: 32,398,678 | positive | AluSx3 | A6 |
| chr2: 32,399,507 | positive | AluJo | – |
| chr2: 32,402,087 | positive | AluSz | Ruhr 14 |
| chr2: 32,406,792 | negative | AluSx | – |
| chr2: 32,411,515 | negative | AluSx1 | – |
a
Chr2: 32,280,000–32,412,000.