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. 2014 Oct 10;5(4):667–676. doi: 10.5306/wjco.v5.i4.667

Table 1.

Qualified genome-wide association studies at the 15q25.1 region on the risk of lung cancer

Date PubMed ID Ref. Initial sample size Replication sample size Chromosome position Mapped gene SNP Context P value OR (95%CI) Platform
8/4/2009 19654303 Broderick et al[9] 1952 European ancestry cases, 1438 European ancestry controls 5608 European ancestry cases, 6767 European ancestry controls 78806023 AGPHD 1 rs8034191 intron 3.00E-26 1.29 (1.23-1.35) Illumina
11/2/2008 18978790 McKay et al[6] 2971 cases, 3746 controls 2899 cases, 5573 controls 78894339 CHRNA 3 rs1051730 cds- synon 1.00E-15 1.35 (1.25-1.45) Illumina
11/2/2008 18978787 Wang et al[8] 1952 cases, 1438 controls 7579 cases, 8236 controls 78908032 CHRNA 3 rs8042374 intron 8.00E-12 NR Illumina
9/17/2008 18780872 Liu et al[10] 194 cases, 219 controls 3878 cases, 4831 controls 78806023 AGPHD 1 rs8034191 intron 1.00E-8 1.38 (1.17-1.64) Affymetrix
4/3/2008 18385676 Amos et al[2] 1154 cases, 1137 controls 2724 cases, 3694 controls 78806023 AGPHD 1 rs8034191 intron 3.00E-18 1.30 (1.15-1.47) Illumina
4/3/2008 18385738 Hung et al[3] 1926 cases, 2522 controls 2513 cases, 4752 controls 78806023 AGPHD 1 rs8034191 intron 5.00E-20 1.30 (1.23-1.37) Illumina
10/15/ 2009 19836008 Landi et al[11] 5739 European descent cases, 5848 European descent controls 7561 European descent cases, 13818 European descent controls 78894339 CHRNA 3 rs1051730 cds- synon 2.00E-51 1.31 (1.27-1.36) Illumina