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. Author manuscript; available in PMC: 2014 Aug 12.
Published in final edited form as: Br J Haematol. 2013 Feb 14;161(2):270–278. doi: 10.1111/bjh.12245

Table III.

SNPs associated with haemolytic score.

Variant information
Meta- analysis
CSSCD
SNP Chr Gene bp Coded
allele
Non-
coded
allele
MAF β SE P-value β SE P-value
rs7203560 16 NPRL3 184390 C A 0·07 −0·44 0·07 2·06 × 10−09 −0·44 0·09 6·04 × 10−07
rs7948471 11 OR51I2,OR51I1 5471746 A G 0·21 −0·26 0·04 3·03 × 10−10 −0·21 0·05 5·87 × 10−05
rs7938426 11 OR51I2,OR51I1 5471832 G A 0·21 −0·25 0·04 1·09 × 10−08 −0·21 0·05 6·08 × 10−05
rs2445284 11 OR51L1 5029703 G A 0·05 −0·82 0·07 1·34 × 10−29 −0·42 0·10 7·39 × 10−05
Variant information
Walk-PHaSST
PUSH
London
SNP Chr Gene bp Coded
allele
Non-
coded
allele
MAF β SE P-value β SE P-value β SE P-value
rs7203560 16 NPRL3 184390 C A 0·07 −0·53 0·22 0·014 −0·13 0·31 0·672 −0·42 0·20 0·0367
rs7948471 11 OR51I2, OR51I1 5471746 A G 0·21 −0·35 0·11 0·002 −0·39 0·14 0·004 −0·46 0·15 0·017
rs7938426 11 OR51I2, OR51I1 5471832 G A 0·21 −0·37 0·11 0·0012 −0·39 0·14 0·004 NA NA NA
rs2445284 11 OR51L1 5029703 G A 0·05 −1·32 0·15 1·60 × 10−17 −1·75 0·17 3·01 × 10−21 0·41 0·28 0·146

Single nucleotide polymorphisms (SNPs) meeting significance threshold (5 × 1004) in the CSSCD study that replicate in the three independent cohorts. The table reports the SNP identifier from dbSNP, chromosome (Chr), physical coordinates [human genome (hg)19], the coded allele in PLINK (also minor allele) and the non-coded allele, the minor allele frequency (MAF), the gene clusters where the SNP is located, and regression coefficient (β), standard error (SE) and P-value in each study. Additive models of association were used in all studies adjusting for age and gender, bp denotes position of the SNP according to hgl9 coordinates.