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. 2014 Jul 29;15(1):636. doi: 10.1186/1471-2164-15-636

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© Padrón et al.; licensee BioMed Central Ltd. 2014

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly credited. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Annotation of the detected Anopheles gambiae variants in mapped reads from the midgut transcriptome. The type of variant in either the G3 or L3-5 An. gambiae strain vs. the pink-eyed laboratory strain of An. gambiae (PEST; AgamP3.6) reference genome. Variant annotation was performed using a program for annotating and predicting the effects of single-nucleotide polymorphisms (snpEFF).