Table 1.
Distribution of Anopheles gambiae midgut transcripts by Cufflinks class code
| Transcript class codes | Number | Percentage |
|---|---|---|
| GENIC | 5483 | 23.95 |
| Complete match | 5483 | 23.95 |
| Novel isoform | 4940 | 21.58 |
| Within reference intron | 2550 | 11.14 |
| Read mapping errors | 15 | 0.07 |
| Overlap | 517 | 2.26 |
| Pre-mRNA | 470 | 2.05 |
| Exonic overlap to opposite strand | 131 | 0.57 |
| Subtotal | 14106 | 61.62 |
| INTERGENIC | ||
| Polymerase run-on | 1821 | 7.96 |
| Unknown Intergenic | 5450 | 23.81 |
| Repeat | 707 | 3.09 |
| Multiple classifications | 805 | 3.52 |
| Subtotal | 8783 | 38.38 |
| TOTAL | 22889 | 100 |
Number of Anopheles gambiae midgut transcripts for each Cufflinks class code and as a percentage of the total.