Table 2. Protein modifying missense mutations found in the B117H and B140H cells, but not found in the respective parental cell lines. Predicted detrimental mutations in bold.
Variant | Seq. | Protein | |||||
---|---|---|---|---|---|---|---|
Cell Line | Gene | Position | Ref. | Var. | Prevalence | Depth | Change |
B117H | Commd5 | chr15:76730961 | T | G | 0.37 | 38 | L43V |
Dram1 | chr10:87803336 | G | A | 0.53 | 17 | V91I | |
Kdm3b | chr18:34987086 | T | C | 0.40 | 30 | S1157P | |
Kdm5c | chrX:148705903 | G | T | 0.33 | 39 | V1222L | |
Pigt | chr2:164328088 | C | T | 0.47 | 108 | P386S | |
Prkacb | chr3:146409579 | G | T | 0.44 | 94 | E209D | |
Pus7l | chr15:94358455 | C | T | 0.37 | 19 | R499C | |
Pyroxd1 | chr6:142303201 | A | G | 0.43 | 7 | N179S | |
Rasgrp2 | chr19:6407273 | G | T | 0.41 | 99 | S349I | |
Susd1 | chr4:59328600 | T | A | 0.35 | 72 | S748T | |
Vps33b | chr7:87432008 | G | A | 0.37 | 27 | D414N | |
B140H | Atpbd4 | chr2:114470474 | C | G | 0.45 | 33 | L99V |
Chd7 | chr4:8678934 | A | G | 0.50 | 6 | N95D | |
Map3k11 | chr19:5700807 | G | A | 0.38 | 52 | M684I | |
Mettl16 | chr11:74609506 | G | A | 0.34 | 67 | R203Q | |
Pbrm1 | chr14:31863259 | A | C | 0.37 | 62 | S375R | |
Rnf149 | chr1:39609321 | G | A | 0.49 | 142 | C394Y | |
Smarca4 | chr9:21445509 | G | A | 0.49 | 164 | E525K | |
Spag5 | chr11:78118221 | C | T | 0.42 | 73 | S284L | |
Usp34 | chr11:23321104 | C | G | 0.50 | 38 | L1812V | |
Zfp668 | chr7:135009900 | G | A | 0.43 | 37 | R542Q |