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. 2014 Jul 24;2014:539410. doi: 10.1155/2014/539410

Table 3.

Alignment tools key.

Acronym Tool Version Variant Technology
bt-2.0.6 Bowtie2 2.0.6 original Pthreads
bt-2.2.1 Bowtie2 2.2.1 original Pthreads
bt-FF Bowtie2 2.2.1 porting FastFlow
BWA-MEM BWA MEM 0.7.9a original Pthreads
BWA-MEM-FF BWA MEM 0.7.9a porting FastFlow
BLASR BLASR 2.1 original Pthreads