Table 4. Basic statistics of the mapping experiment, differential expression analysis and BLAST annotation of enriched transcripts.

	Embryonic Samples	Postembryonic samples
# raw reads	332,245,126	292,831,388
# raw base bairs	33,556,757,726	29,575,970,188
# trimmed reads	331,060,788	292,205,142
(% of raw reads)	(99.64)	(99.79)
# mapped reads	322,037,900	285,150,827
(% of trimmed reads)	(97.27)	(97.59)
# reads aligned concordantly 0 times	112,476,108	92,182,498
(% of trimmed reads)	(33.97)	(31.55)
# reads aligned concordantly exactly 1 time	18,959,642	23,955,144
(% of trimmed reads)	(5.73)	(8.20)
# reads aligned concordantly >1	199,625,038	176,067,500
times (% of trimmed reads)	(60.30)	(60.25)
# reads aligned discordantly 1 time	1,096,510	997,018
(% of reads aligned concordantly 0 times)	(0.97)	(1.08)
# enriched transcripts	29	918
# enriched transcripts with BLAST hits	7	349