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. 2014 Aug 14;10:44. doi: 10.1186/1744-8069-10-44

Table 1.

Neuropeptide and receptor expression in dorsal root ganglia and trigeminal ganglia

 
Dorsal root ganglion
Trigeminal ganglion
Gene symbol and gene name Mouse TRPV1 lineage RPKM Mouse non-TRPV1 lineage RPKM Rat whole ganglion RPKM Mouse whole ganglion RPKM Rat whole ganglion RPKM Human whole ganglion RPKM
Grp, gastrin-releasing peptide
-
-
-
-
-
0.1
Grpr, gastrin releasing peptide receptor
0.2
0.2
-
0.3 ± 0
0.1 ± 0
0.1
Nmb, neuromedin B
170.3
73.7
32.6 ± 4.49
16.5 ± 0.9
13.0 ± 0.3
7.5
Nmbr, neuromedin B receptor
0.1
0.1
0.2 ± 0.02
0.1 ± 0
0.3 ± 0
0.2
Nppa, natriuretic peptide A; ANF
1.5
1.2
5.1 ± 0.73
1.0 ± 0.1
0.8 ± 0.1
1.8
Nppb, natriuretic peptide B; BNP
24.1
0.2
0.7 ± 0.14
2.0 ± 0.1
-
0.8
Nppc, natriuretic peptide C; CNP
-
0.1
-
0.1 ± 0
0.1 ± 0
0.4
Npr1, natriuretic peptide receptor 1; Npra
0.7
1.2
0.8 ± 0.06
1.2 ± 0
0.9 ± 0
0.9
Npr2, natriuretic peptide receptor 2; Nprb
38.1
30
31.7 ± 0.85
35.4 ± 0.4
36.7 ± 0.8
15.3
Npr3, natriuretic peptide receptor 3; Nprc
0.1
0.8
4.1 ± 0.44
2.6 ± 0.1
4.3 ± 0.5
0.3
Tac1, protachykinin-1 597.7 14.1 140.3 ± 10.92 59.8 ± 2.84 122.2 ± 4.9 44.1

The values in the table are average expression levels (and where applicable ± SEM) in RPKM of itch related neuropeptides and their receptors. RPKM is an acronym for Reads Per Kilobase of exon model per Million mapped reads, a normalization which takes into consideration the length of coding exons of genes and depth of sequencing [9]. The mouse DRG dataset consists of TRPV1 lineage and non-TRPV1 lineage RNA samples which were obtained from BAC-TRPV1 promoter-Cre mice as described (Mishra et al., 2011) [6]. Annotation builds mm10, rn4, and hg19 were used, respectively, for the mouse, rat and human genome mapping. Dashes (-) represent values of 20 reads or below; this number of reads is too inaccurate for further consideration.