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. 2014 Jul 17;42(14):9209–9216. doi: 10.1093/nar/gku625

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© The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 1. — Base sequences of Class I CRP-dependent promoters. The sequences of the non-template strands of different promoters constructed in this study are shown. Sequences are numbered with the transcript start site as +1. The locations of the DNA sites for CRP are are single underlined. The UP elements/UP subsites are wavy underlined. The extended −10 motifs are shadowed. The different promoters are named according to the location of the UP element and the DNA site for CRP. (a) A set of promoters where the location of the DNA site for CRP was varied. (b) A set of promoters where both the location of the UP element and the DNA site for CRP were varied synchronously. (c) A set of promoters where both the location of the distal UP subsite and the DNA site for CRP were varied synchronously. (d) A set of promoters where both the location of the proximal UP subsite and the DNA site for CRP were varied synchronously. (e) A set of promoters where the sequence of the proximal UP subsite in (d) are placed to the position of distal UP subsite.