Table 3. Association results of two populations, assessed using Fisher’s exact test.

SNP	Type	Allele	Frequencies in ZZ96*		P value	Frequencies in ZN96*		P value
			susceptible	resistant		susceptible	resistant
all-10291-285	C/T	C	0.3261	0.1023	0.0002709	–	–	–
all-12235-168	A/C	A	0.04444	0.1364	0.03771	–	–	–
all-14046-809	C/T	C	0.3605	0.3214	0.6297	0.4886	0.337	0.04886
all-2993-1987	G/A	G	0.131	0.3256	0.003294	0.2727	0.3953	0.1079
all-31130-1125	G/T	G	0.1548	0.3256	0.01182	0.2093	0.2667	0.3835
all-43668-953	C/T	C	0.2143	0.3953	0.01259	–	–	–
all-43684-1766	C/A	C	0.5652	0.3488	0.004372	0.4432	0.5319	0.2397
all-4912-525	G/A	G	0.2826	0.4535	0.02012	0.2609	0.383	0.08561
all-4989-3302	C/T	C	0.4643	0.4186	0.6433	0.4205	0.2444	0.01671
all-53308-760	C/T	C	0.3404	0.1064	0.0001847	0.3295	0.106	0.0002715
n-10658-1017	A/G	A	0.2308	0.4651	0.001936	0.2111	0.234	0.7267
n-11978-1212	T/C	T	0.381	0.186	0.006229	–	–	–
n-13362-1534	A/G	A	0.4103	0.1786	0.001681	–	–	–
n-17218-1253	T/C	T	0.2317	0.4359	0.00728	0.3864	0.4556	0.3664
n-30227-1794	A/G	A	0.5341	0.314	0.003723	0.413	0.3936	0.8813
n-37639-1689	G/T	G	0.1585	0.02381	0.002537	–	–	–
n-53835-1616	A/G	A	0.2619	0.5119	0.001443	–	–	–
n-63402-535	C/T	C	0.4205	0.3488	0.3534	0.5	0.2447	0.0004227
n-63715-817	A/G	A	0.025	0.1395	0.01024	0.06667	0.06383	1
n-63953-874	G/A	G	0.2	0.3864	0.01103	0.1932	0.2717	0.2233
n-8980-801	T/C	T	0.2065	0.25	0.5896	0.2	0.337	0.04516
s-8230-781	A/C	A	0.025	0.1136	0.03445	–	–	–

*Please see the “Hybridization of the two subspecies and the heat stress experiment” section for ZZ96 and ZN96.