Table 4. Top annotated transcripts differentially expressed in resistant oysters at early time points after challenge with R. crassostreae (GX 1 and 5 days).
| Contig | logFC_1d | logFC_5d | Annotation | Accession # |
| comp1506_c0_seq4 | 2.71 | 3.08 | ADAMTS8 | XP_002940685 |
| comp4626_c0_seq4 | 3.34 | - | alpha-ketoglutarate-dependent hypophosphite dioxygenase-like | XP_002944900 |
| comp1285_c1_seq8 | - | −3.90 | arginase type-i-like, arginase-i | AEB70965 |
| comp1285_c1_seq3 | - | −3.54 | arginase type-i-like, arginase-i | XP_002130834 |
| comp5608_c0_seq1 | - | −6.92 | c-type lectin | ABB71672 |
| comp24124_c0_seq1 | - | 4.49 | ched related family member (ptr-19) | XP_002734100 |
| comp5722_c1_seq1,2 | - | −3.35 | collagen alpha | XP_001512734 |
| comp7972_c0_seq1 | - | −8.09 | cubilin | XP_002734392 |
| comp7972_c0_seq4 | - | −3.11 | cubilin | XP_002612977 |
| comp1788_c0_seq4 | - | 3.26 | fibrinolytic enzyme | CAA64472 |
| comp18756_c0_seq3 | 3.48 | − | fibropellin ia | XP_002601363 |
| comp6161_c0_seq11 | - | 2.48 | furin | AAA49718 |
| comp810_c1_seq1 | - | −3.40 | heat shock protein 22 | ACU83231 |
| comp18757_c0_seq1 | - | −7.14 | hla-b associated transcript 1 | XP_003217350 |
| comp2015_c0_seq13 | −7.19 | - | inhibitor of apoptosis (IAP) | AEB54799 |
| comp2015_c0_seq24 | 3.95 | - | inhibitor of apoptosis (IAP) | AEB54800 |
| comp15440_c0_seq1 | 3.18 | - | inhibitor of apoptosis (IAP) | XP_002426441 |
| comp6837_c0_seq1 | 3.02 | - | interleukin 17 | A9XE49 |
| comp3858_c0_seq5 | 3.63 | - | isoleucyl-trna synthetase | NP_001090690 |
| comp5396_c0_seq1 | - | −3.01 | melatonin receptor 1a | ADM73175 |
| comp7137_c0_seq2 | - | 3.26 | organic solute transporter subunit alpha | XP_002732822 |
| comp39520_c0_seq1 | - | −4.31 | polyprotein | XP_002740782 |
| comp24428_c0_seq1 | −8.68 | −8.64 | rapunzel 5 | NP_001103594 |
| comp18902_c0_seq1 | - | −3.43 | rho gtpase | XP_002739105 |
| comp1023_c0_seq2 | - | 2.62 | scavenger receptor cysteine-rich | ACT53266 |
| comp1023_c0_seq3 | 3.07 | 2.93 | scavenger receptor cysteine-rich | XP_001622238 |
| comp18756_c0_seq2 | 3.83 | - | sushi repeat-containing | XP_002664481 |
| comp25746_c0_seq4 | - | −7.60 | tenascin xb | XP_002741293 |
| comp6161_c0_seq5 | 3.49 | - | type 2 proinsulin processing endopeptidase | 2206277A |
Magnitude of differential expression in each treatment group is expressed as log10 fold change (logFC) over expression in the control group (CGX15/30d). The name and accession number for the best BLASTx hits are shown.