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. 2013 Sep;46(9):439–447. doi: 10.5483/BMBRep.2013.46.9.161

Table 2.

SR proteins in humans and rice (47)

Rice Humans

Number of SR proteins 22 12
RS domains >50 aas long; >20% RS content or RS dipeptide >50 aas long; >40% RS content of RS or SR repeat
RRM domains 1-2 Conserved 1-2 Conserved
Additional domains 1-2 zinc knuckle; acidic –terminal extension rich in Ser and Pro 1 zinc knuckle
Not rice specific sub-groups
 SR subfamily 2 RRMs with SWQDLKD motif SF2/ASF: 2 RRMs with SWQDLKD motif
 RSZ subfamily 1 RRM, 1 zinc knuckle SF7/9G8: 1 RRM, 1 zin knuckle
 SC subfamily 1 RRM+SR domain SF2/SC35: 1 RRM+SR domain
Rice specific sub-groups
 SCL subfamily 1 RRM+ 1 N-terminal charged extension N/A
 SC2Z subfamily 1 RRM+ 2 zinc Knuckles + 1 acidic–terminal extension rich in Ser and Pro
 RS subfamily 2 RRMs but without SWQDLKD motif