Table 2.
Rice | Humans | |
---|---|---|
| ||
Number of SR proteins | 22 | 12 |
RS domains | >50 aas long; >20% RS content or RS dipeptide | >50 aas long; >40% RS content of RS or SR repeat |
RRM domains | 1-2 Conserved | 1-2 Conserved |
Additional domains | 1-2 zinc knuckle; acidic –terminal extension rich in Ser and Pro | 1 zinc knuckle |
Not rice specific sub-groups | ||
SR subfamily | 2 RRMs with SWQDLKD motif | SF2/ASF: 2 RRMs with SWQDLKD motif |
RSZ subfamily | 1 RRM, 1 zinc knuckle | SF7/9G8: 1 RRM, 1 zin knuckle |
SC subfamily | 1 RRM+SR domain | SF2/SC35: 1 RRM+SR domain |
Rice specific sub-groups | ||
SCL subfamily | 1 RRM+ 1 N-terminal charged extension | N/A |
SC2Z subfamily | 1 RRM+ 2 zinc Knuckles + 1 acidic–terminal extension rich in Ser and Pro | |
RS subfamily | 2 RRMs but without SWQDLKD motif |