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. 2014 Aug 15;9(8):e104188. doi: 10.1371/journal.pone.0104188

Table 2. QTL detected for FL, FD and FS using the merged data from two locations of the F2 population from the cross ‘PS’ × PI124112.

Trait LG QTL namea Flanking markers Interval size (cM) LOD score a b d b d/[a]b R2c Homologue QTL IDa Homologue published QTLd Referencee
FL II flqs2.1 CMPSNP431-ECM61 38.4 8.44 3.06 2.29 0.75 0.16 flqn2.1 fl2.1 [54]
FL IIIb flqs3b.1 ECM205-CMPSNP998 12.9 2.92 + 0.05 flqc3.5 3.5 [14]
FL VIa flqs6a.1 ECM52-CMTCN41 69.1 9.56 + 0.11 flqc6.4 6.4 [14]
FL VIII flqs8.1 GCM241-PSI_25-H03 23.3 16.85 −4.95 −1.71 −0.35 0.34 flqc8.3 8.3 [14]
flqn8.1 fl8.1 [54]
FL Xb flqs10b.1 CMPSNP671-CMPSNP665 31.6 3.02 0.04
FD IIIa fdqs3a.1 CMBR100-AI_18-E05 25.6 2.80 0.11
FD XII fdqs12.1 ECM67-CMTCN14 52 3.47 −1.03 −0.17 −0.17 0.11 fdqi12.1 fw6.10 [65]
FS II fsqs2.1 CMPSNP431-AluICAPS 16.9 6.74 0.27 0.20 0.75 0.17 fsqj2.1 fs2.3 [15]
fsqq2.1 fs2.2 [12]
fsqn2.1 fsh2.1 [54]
FS VIII fsqs8.1 GCM241-PSI_25-H03 23.3 14.85 −0.50 −0.16 −0.32 0.41 fsqc8.3 8.1 in [14]
fsqn8.1 fsh8.1 [54]
FS XII fsqs12.1 AI_35-A08-CMPSNP361 53.1 3.61 0.15 0.03 0.21 0.03 fsqa12.1 fs11.1 [13]
fsqp12.1 fs12.1 [12]
fsqc12.1 12.1 [14]

FL: Fruit Length; FD: Fruit Diameter; FS: Fruit Shape.

a

Nomenclature according to [48].

b

Only calculated for QTL in which the whole population was genotyped with the strongest linked marker(s); for the rest, only the sign is shown.

c

When possible, calculated using the data coming the whole population genotyped with the strongest linked marker(s); for the rest, the value obtained by the QTL analysis using the selective genotyping subset of samples is shown.

d

Nomenclature according to the authors that originally identified the QTL.

e

Reviewed in [48] and, the FS QTL, in [53].