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. 2014 Sep;34(18):3374–3387. doi: 10.1128/MCB.01701-13

TABLE 4.

Primers for quantification of TCRα secondary gene rearrangement by qPCR

Target Primer sequence
Forward (5′–3′) Reverse (5′–3′)
Vα3-Jα30 CCCAGTGGTTCAAGGAGTGA AGATGTGTCCCTTTTCCAAAGATG
Vα6-Cα ACCACTGTATCCTGAGAGTAG CTGGTACACAGCAGGTTC
Vα19-Cα CTGCTTCTGACAGAGCTCCAG CTGGTACACAGCAGGTTC
Vα3-Jα2 CCCAGTGGTTCAAGGAGTGA ACCACTTAGTCCTCCAGTATTC
Tcra constant region (Cα) TTCAAAGAGACCAACGCCAC TTCAGCAGGAGGATTCGGAG