TABLE 2.
Total Mg2+ (free Mg2+) (mM)a | Total dNTPs (μM) | No. of white and faint blue colonies | Total no. of colonies | CMF (×10−3) | CMF − Bkg (×10−3)c | Relative fidelityd | P valuee |
---|---|---|---|---|---|---|---|
—b | —b | 17 | 10,138 | 1.7 | |||
6 (5.6) | 100 | 71 | 4,328 | 16 | 14 | 1 | |
2 (1.98) | 5 | 27 | 2,866 | 9.4 | 7.7 | 1.9 | 0.0066 |
2 (1.6) | 100 | 117 | 12,602 | 9.3 | 7.6 | 1.9 | <0.0001 |
1.5 (1.1) | 100 | 51 | 5,983 | 8.5 | 6.8 | 2.1 | <0.0001 |
1 (0.6) | 100 | 54 | 6,492 | 8.3 | 6.6 | 2.1 | <0.0001 |
0.25 (0.24) | 5 | 19 | 5,195 | 3.7 | 2.0 | 7.0 | <0.0001 |
Free Mg2+ was calculated as described in Materials and Methods using the dissociation constant for Mg2+ and ATP.
—, background was determined by transfecting plasmids with unfilled gaps into bacteria. CMF was defined as white and faint blue colonies divided by total colonies. Refer to Results and Materials and Methods for details.
CMF − Bkg, frequency minus the background frequency from the first row (see footnote b).
All values are relative to the 6 mM Mg2+/100 μM dNTP CMF − Bkg value (0.014). The 0.014 value was divided by the CMF − Bkg value for each condition to determine relative fidelity. Higher numbers indicate greater fidelity.
Values were calculated using a chi-square analysis after performing the background correction by subtracting (0.0017 × total colonies) from the white and faint blue colonies for each condition. All values were scored against that for the 6 mM Mg2+/100 μM dNTP condition.