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. 2014 Sep;80(17):5265–5273. doi: 10.1128/AEM.01393-14

TABLE 2.

Primersa

Name Sequence Purpose
P1 5′-GGAATTCCGACCTCGTAACCGATGTCGA-3′ Construction of the lsrB deletion mutant
P2 5′-AAAGGCTCAGCCGGAGAAGC-3′ Construction of the lsrB deletion mutant
P3 5′-CTCCGGCTGAGCCTTTCGATCCGTTCAATTGCCCG-3′ Construction of the lsrB deletion mutant
P4 5′-GCTCTAGAGCACGGCGAGATGAGATGAAA-3′ Construction of the lsrB deletion mutant
P5 5′-GGAATTCCATATGGGGGATTCTATGTCGCTGGACT-3′ Cloning of lsrB gene
P6 5′-GCTCTAGATCAGAAGTTCCAGTTTCTCGCTTTA-3′ Cloning of lsrB gene
P7 5′-TGCACTGCAGCCGGCGACGTGACCGAC-3′ Cloning of lsrB promoter
P8 5′-CGGGATCCGGGCGTGCCGATGAAAGA-3′ Cloning of lsrB promoter
P9 5′-TGCACTGCAGTTGCCCAAATCCCCAATCCT-3′ Cloning of trxB promoter
P10 5′-CGGGATCCGCTTTTGTCCTTCGTCCGCC-3′ Cloning of trxB promoter
P11 5′-CGGGATCCTTGCCCAAATCCCCAATCCT-3′ Cloning of lrp3 promoter
P12 5′-TGCACTGCAGGCTTTTGTCCTTCGTCCGCC-3′ Cloning of lrp3 promoter
P13 5′-TGCACTGCAGATTTTGTTATTGAAGAACTGACCG-3′ Cloning of lpsC promoter
P14 5′-CGGGATCCGAGACTCTCGATGCACTTGCC-3′ Cloning of lpsC promoter
P19 5′-TCCGGAAATCCAGGTACAGC-3′ qRT-PCR of lsrB
P20 5′-ATGCGATATGCGCGGAT-3′ qRT-PCR of lsrB
P21 5′-TCAGAAAGGGACCGACCTCTT-3′ qRT-PCR of lpsB
P22 5′-CCAGTCGGGAATATTCGTGTG-3′ qRT-PCR of lpsB
P23 5′-GCCTATCTCGGCAAGTGCAT-3′ qRT-PCR of lpsC
P24 5′-GATGTTGAAGCACCAGGGCT-3′ qRT-PCR of lpsC
P25 5′-ATCTTTGGCTGCTTGGCGA-3′ qRT-PCR of lpsE
P26 5′-ATGAACCATTGCGGCCCTT-3′ qRT-PCR of lpsE
P27 5′-ATCGTGCGCTTCTGAATGC-3′ qRT-PCR of lrp3
P28 5′-TCCTGAAAGCTCGCAAGGTT-3′ qRT-PCR of lrp3
P29 5′-AAGGTGATCTGGGACCACGA-3′ qRT-PCR of trxB
P30 5′-GCGAAGTTTGCCCTTGAAGA-3′ qRT-PCR of trxB
P31 5′-GATCGTCATGTAGCGCAGGA-3′ qRT-PCR of rpsF
P32 5′-CCTCGCTCGGCAGGACAT-3′ qRT-PCR of rpsF
P33 5′-CATGGCTACATGCTGACAGCCTA-3′ 5′-RACE of outRAP
P34 5′-CGCGGATCCACAGCCTACTGATGATCAGTCGATGGAAA-3′ 5′-RACE of inRAP
P35 5′-TTGTCGAGGATGAGCTGTAC-3′ 5′-RACE of lsrB
P36 5′-TTGGCTTGTCCGTCGTCT-3′ 5′-RACE of lsrB
P37 5′-AAGGTCGGCTCGGTTTCGAT-3′ 5′-RACE of trxB
P38 5′-GGTTACGAGGTCGTTGAC-3′ 5′-RACE of trxB
P39 5′-AAAGTCCGATTCCCCGGA-3′ 5′-RACE of lrp3
P40 5′-TTGAGATTGGCGTCGGACTG-3′ 5′-RACE of lrp3
P41 5′-CGATCTCGTCTGATGCTGC-3′ 5′-RACE of lpsC
P42 5′-TACATGAAACGGATGGGCCA-3′ 5′-RACE of lpsC
P43 5′-TGGGACAAACTGCGCATTT-3′ RT-PCR of lsrB
P44 5′-GCTTTCGAGCTTCATCAGCAC-3′ RT-PCR of lsrB
P45 5′-ACATCCGACATGGCAATCG-3′ RT-PCR of trxB
P46 5′-AGGTATTTCTCCGCTTCGAGC-3′ RT-PCR of trxB
P47 5′-ATCGTGCGCTTCTGAATGC-3′ RT-PCR of lrp3
P48 5′-TCCTGAAAGCTCGCAAGGTT-3′ RT-PCR of lrp3
P49 5′-GCCTATCTCGGCAAGTGCAT-3′ RT-PCR of lpsC
P50 5′-GATGTTGAAGCACCAGGGCT-3′ RT-PCR of lpsC
P51 5′-CATATTCACTTCGGCACGGAG-3′ RT-PCR of lpsD
P52 5′-GCAACTGCCAGGCCATTATG-3′ RT-PCR of lpsD
P53 5′-CAAGGTTTTTGTGCATGCAACTGC-3′ EMSA
P54 5′-GTTCCAAAAACACGTACGTTGACG-3′ EMSA
a

Italics represent restriction endonuclease sites.