TABLE 1.
Genus | No. of isolates | No. of isolates identified by MALDI-TOF MSa |
No. of misidentificationsb | No. of reference spectrac | |||
---|---|---|---|---|---|---|---|
Genus level | Species level (cutoff, 2.0) | Species level (cutoff, 1.7) | No identification | ||||
Acremonium | 3 | 1 | 0 | 1 | 2 | 0 | 1 |
Aspergillus | 24 | 24 | 17 | 21 | 0 | 0 | 90 |
Beauveria | 3 | 1 | 0 | 1 | 2 | 0 | 1 |
Chrysosporium | 3 | 3 | 2 | 3 | 0 | 0 | 3 |
Fusarium | 6 | 6 | 6 | 6 | 0 | 0 | 36 |
Lichtheimia | 3 | 3 | 3 | 3 | 0 | 0 | 11 |
Mucor | 3 | 1 | 0 | 0 | 2 | 0 | 5 |
Paecilomyces | 9 | 6 | 6 | 6 | 3 | 0 | 11 |
Penicillium | 5 | 4 | 2 | 4 | 1 | 1 | 67 |
Rhizopus | 3 | 3 | 1 | 3 | 0 | 0 | 15 |
Scedosporium | 6 | 6 | 6 | 6 | 0 | 0 | 6 |
Schizophyllum | 3 | 3 | 1 | 3 | 0 | 0 | 4 |
Scopulariopsis | 6 | 0 | 0 | 0 | 6 | 0 | 9 |
Trichoderma | 3 | 2 | 1 | 2 | 1 | 1 | 3 |
Trichurus | 3 | 2 | 0 | 0 | 1 | 0 | 1 |
Total (%) | 83 (100) | 65 (78.3) | 45 (54.2) | 59 (71.1) | 18 (21.7) | 2 (2.4) | 263 |
MALDI-TOF MS identification applying a genus cutoff of 1.7 and species cutoffs of 2.0 and 1.7, respectively, using the Filamentous Fungi Library 1.0 (Bruker Daltonik).
Misidentifications by MALDI-TOF MS: Penicillium olsonii (assignment by ITS sequence analysis) misidentified as Penicillium brevicompactum and Trichoderma citrinoviride (assignment by ITS sequence analysis) misidentified as Trichoderma koningii.
Number of reference spectra in the Filamentous Fungi Library 1.0 (Bruker Daltonik).